Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0235600-00 | Rice | nucleus | 44.11 | 92.8 |
| Os01t0711800-00 | Rice | nucleus | 92.02 | 81.48 |
| KRH23302 | Soybean | nucleus | 68.44 | 54.05 |
| Os05t0539700-01 | Rice | nucleus | 74.52 | 53.85 |
| Os06t0149400-01 | Rice | nucleus | 71.1 | 49.47 |
| GSMUA_AchrUn_... | Banana | nucleus | 65.78 | 49.01 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 71.86 | 48.96 |
| Solyc03g121700.2.1 | Tomato | nucleus | 68.44 | 48.39 |
| KRH10020 | Soybean | nucleus | 66.16 | 47.54 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 68.82 | 47.51 |
| CDX97517 | Canola | nucleus | 49.43 | 47.1 |
| Bra027399.1-P | Field mustard | nucleus | 49.05 | 46.74 |
| PGSC0003DMT400006378 | Potato | nucleus | 44.49 | 46.61 |
| CDY23642 | Canola | nucleus | 51.71 | 46.26 |
| AT3G13782.2 | Thale cress | cytosol | 51.71 | 42.9 |
| Os02t0576700-01 | Rice | extracellular | 19.77 | 20.63 |
| Os04t0459700-02 | Rice | nucleus | 20.15 | 20.46 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | UniProt:A0A0P0WYR0 | ProteinID:BAS98596.1 | ncoils:Coil | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006334 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | InterPro:NAP-like_sf | InterPro:NAP_family | EnsemblPlantsGene:Os06g0611700 | EnsemblPlants:Os06t0611700-00 |
| PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF98 | SUPFAM:SSF143113 | UniParc:UPI000393B8C8 | SEG:seg |
Description
Similar to Nucleosome assembly protein 1-like protein 3. (Os06t0611700-00)
Coordinates
chr6:-:24390137..24393848
Molecular Weight (calculated)
30710.4 Da
IEP (calculated)
4.080
GRAVY (calculated)
-0.773
Length
263 amino acids
Sequence
(BLAST)
(BLAST)
001: MNGIELSSED KAILVETLKN KLQALAEQHV DVLESLAPSV RKRVDVLMEI QSQHDELEVK FFEEKAALEA KYQKLYGPLY SKIHESDEEA LKYLKDIKWC
101: RIDDPKGFKF EFFFYTNPFF KNQVLTKTYH MIDEDDEPIL EKAIGTEIEW HPGYCLTQEV LTKESSESTK PITKTEECES FFNFFSPPQV PDDDAKIDEN
201: TAEELQNQME RDYDIASTLR DKIIPHAVSW FTREAVQDED YGASWVDDEE EDDNNDEYSD EEA
101: RIDDPKGFKF EFFFYTNPFF KNQVLTKTYH MIDEDDEPIL EKAIGTEIEW HPGYCLTQEV LTKESSESTK PITKTEECES FFNFFSPPQV PDDDAKIDEN
201: TAEELQNQME RDYDIASTLR DKIIPHAVSW FTREAVQDED YGASWVDDEE EDDNNDEYSD EEA
001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ
Arabidopsis Description
NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.