Factsheet for Os01t0711800-00

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
YLoc:	nucleus

cytosol: 15980199
nucleus: 15980199

gfp PMID: 15980199 doi

A Dong, Z Liu, Y Zhu, F Yu, Z Li, K Cao, WH Shen

State Key Laboratory of Genetic Engineering, Department of Biochemistry, School of Life Sciences, Fudan University, Shanghai 200433, People's Republic of China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os06t0611700-00	Rice	nucleus	81.48	92.02
Os05t0235600-00	Rice	nucleus	37.37	88.8
Os05t0539700-01	Rice	nucleus	73.74	60.16
KRH23302	Soybean	nucleus	66.67	59.46
VIT_11s0016g02050.t01	Wine grape	nucleus	73.4	56.48
GSMUA_AchrUn_...	Banana	nucleus	65.99	55.52
PGSC0003DMT400006378	Potato	nucleus	46.8	55.38
KRH10020	Soybean	nucleus	68.01	55.19
Solyc03g121700.2.1	Tomato	nucleus	69.02	55.11
CDX97517	Canola	nucleus	51.18	55.07
Bra027399.1-P	Field mustard	nucleus	50.84	54.71
Os06t0149400-01	Rice	nucleus	69.36	54.5
VIT_09s0002g02330.t01	Wine grape	nucleus	69.7	54.33
CDY23642	Canola	nucleus	53.2	53.74
AT3G13782.2	Thale cress	cytosol	54.55	51.1
Os04t0459700-02	Rice	nucleus	21.21	24.32
Os02t0576700-01	Rice	extracellular	20.54	24.21

Protein Annotations

MapMan:12.2.6	Gene3D:3.30.1120.90	UniProt:A0A0P0V7A1	ProteinID:BAS73987.1	ncoils:Coil	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0006334	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf	InterPro:NAP_family	EnsemblPlantsGene:Os01g0711800	EnsemblPlants:Os01t0711800-00
PFAM:PF00956	PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	SUPFAM:SSF143113	UniParc:UPI0001B66CF5	SEG:seg

Description

nucleosome assembly protein 1-like protein 3, Nucleosome assembly protein 1;3Nucleosome assembly protein (NAP) family protein. (Os01t0711800-00)

Coordinates

chr1:-:29580715..29583046

Molecular Weight (calculated)

34489.7 Da

IEP (calculated)

4.002

GRAVY (calculated)

-0.739

Length

297 amino acids

Sequence
(BLAST)

001: ELLSEEKAIL VETLKNKLQA LAEQHVDVLE SLAPVVRKRV DVLIEIQSQH DELEAKFLEE KAALEANYQK LYGPLYSKRS EIVSGVLEVE GETEEREEKG
101: VPDFWLKAMK NNEILAEEIH ESDEEALKYL KDIKWCRIDD PKGFKFEFFF DTNPFFKNQV LTKTYHMIDE DDEPILEKAI GTEIEWHPGN CLTQEVLTKE
201: SSESTKPITK TEEYESFFNF FSPPQVPEDD AKIDENTAEE LQNQMERDYD IASTLRDKII PHVVSWFTGE AVQDEDYGAS WVDDEEDDDD EYSDEEA

Best Arabidopsis Sequence Match ( AT2G19480.3 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.