Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97517 | Canola | nucleus | 97.83 | 97.83 |
| CDY23642 | Canola | nucleus | 95.65 | 89.8 |
| AT3G13782.2 | Thale cress | cytosol | 83.33 | 72.56 |
| Os01t0711800-00 | Rice | nucleus | 54.71 | 50.84 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 34.06 | 49.47 |
| Os06t0611700-00 | Rice | nucleus | 46.74 | 49.05 |
| Os05t0235600-00 | Rice | nucleus | 22.1 | 48.8 |
| KRH23302 | Soybean | nucleus | 56.88 | 47.15 |
| GSMUA_AchrUn_... | Banana | nucleus | 58.33 | 45.61 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 62.68 | 45.41 |
| Bra006957.1-P | Field mustard | nucleus | 37.32 | 45.37 |
| GSMUA_Achr7P09020_001 | Banana | nucleus | 60.87 | 45.28 |
| KRH10020 | Soybean | nucleus | 59.42 | 44.81 |
| Os05t0539700-01 | Rice | nucleus | 59.06 | 44.78 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 59.78 | 44.59 |
| TraesCS1B01G377000.1 | Wheat | nucleus | 57.61 | 44.29 |
| KXG22431 | Sorghum | nucleus | 59.78 | 44.12 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 61.23 | 43.78 |
| TraesCS1D01G364900.1 | Wheat | nucleus | 57.61 | 43.44 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 57.97 | 43.24 |
| Bra013951.1-P | Field mustard | nucleus | 56.88 | 42.9 |
| Bra036720.1-P | Field mustard | nucleus | 57.25 | 42.82 |
| PGSC0003DMT400021185 | Potato | nucleus | 50.72 | 42.81 |
| Zm00001d036177_P001 | Maize | nucleus | 56.88 | 42.78 |
| Bra040674.1-P | Field mustard | nucleus | 57.61 | 42.29 |
| OQU75826 | Sorghum | nucleus | 58.33 | 42.26 |
| PGSC0003DMT400012517 | Potato | nucleus | 53.26 | 42.12 |
| Zm00001d045352_P002 | Maize | extracellular, mitochondrion | 57.97 | 42.11 |
| Solyc06g062690.2.1 | Tomato | nucleus | 52.9 | 41.83 |
| Os06t0149400-01 | Rice | nucleus | 57.25 | 41.8 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 60.51 | 41.13 |
| Solyc08g063000.2.1 | Tomato | nucleus | 51.45 | 40.34 |
| TraesCS1A01G360500.1 | Wheat | nucleus | 57.61 | 40.05 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 12.32 | 40.0 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 12.32 | 40.0 |
| TraesCS7A01G102400.1 | Wheat | nucleus | 55.43 | 39.95 |
| TraesCS7D01G096300.1 | Wheat | nucleus | 55.07 | 39.79 |
| Bra031083.1-P | Field mustard | nucleus | 54.35 | 39.58 |
| TraesCS4A01G401100.1 | Wheat | nucleus | 54.71 | 39.53 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 59.06 | 38.35 |
| Bra002778.1-P | Field mustard | nucleus | 57.25 | 38.07 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 55.8 | 37.38 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 11.23 | 37.35 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 12.68 | 33.65 |
| Zm00001d011130_P002 | Maize | nucleus | 51.09 | 33.33 |
| TraesCS3A01G357000.1 | Wheat | mitochondrion | 27.54 | 30.77 |
| Bra016541.1-P | Field mustard | cytosol | 23.55 | 27.78 |
| Bra025687.1-P | Field mustard | cytosol | 18.48 | 21.89 |
| HORVU7Hr1G111180.1 | Barley | cytosol | 2.54 | 14.89 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 12.32 | 13.99 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | EnsemblPlantsGene:Bra027399 | EnsemblPlants:Bra027399.1 | EnsemblPlants:Bra027399.1-P | ncoils:Coil |
| GO:GO:0000724 | GO:GO:0003674 | GO:GO:0003682 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0006139 | GO:GO:0006259 |
| GO:GO:0006334 | GO:GO:0006950 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016043 |
| GO:GO:0042393 | GO:GO:0046686 | UniProt:M4EF37 | InterPro:NAP-like_sf | InterPro:NAP_family | PFAM:PF00956 |
| PANTHER:PTHR11875 | PANTHER:PTHR11875:SF99 | SUPFAM:SSF143113 | UniParc:UPI0002547F8B | SEG:seg | : |
Description
AT3G13782 (E=2e-103) NFA04, NAP1;4, NFA4 | NAP1;4 (NUCLEOSOME ASSEMBLY PROTEIN1;4); DNA binding / chromatin binding
Coordinates
chrA05:-:20713843..20715564
Molecular Weight (calculated)
31874.4 Da
IEP (calculated)
4.394
GRAVY (calculated)
-0.671
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNEENIMSI EAVHNTGGDS SDALVSKRVL FLKDIQVKHD ELEEKFIEEK AALEAKYDNL YKPLFNKRYE IVNGVAEAET EKGVPNFWLI AMKTNEMLAN
101: EITERDEGAL KYLKDIRCCR IENNSRNFKL EFLFDPNPYF KNSVLSKTYH VTDDDDDGPV LDKVIGTDIK WCPGKCLTHK VVVKKRPKKG TKKVNNIPMT
201: KTENCESFFN FFKPPEIDEV DECYTTMVEE LQNLTDQDYD IAVTIRDKLI PHAVSWFTGE ALVDEDEYND DDENDD
101: EITERDEGAL KYLKDIRCCR IENNSRNFKL EFLFDPNPYF KNSVLSKTYH VTDDDDDGPV LDKVIGTDIK WCPGKCLTHK VVVKKRPKKG TKKVNNIPMT
201: KTENCESFFN FFKPPEIDEV DECYTTMVEE LQNLTDQDYD IAVTIRDKLI PHAVSWFTGE ALVDEDEYND DDENDD
001: MSNEENIKSD NKSGDSSDLP TIPALDIGAE ECDLLAELKN LTLKRPFDVK KLSPKVTKRV LFLKDIQVTH DELEEKFLAE KSALEATYDN LYKPLFAKRY
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
Arabidopsis Description
NAP1;4NFA4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.