Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra027399.1-P | Field mustard | nucleus | 97.83 | 97.83 |
| CDY23642 | Canola | nucleus | 97.1 | 91.16 |
| AT3G13782.2 | Thale cress | cytosol | 84.06 | 73.19 |
| Os01t0711800-00 | Rice | nucleus | 55.07 | 51.18 |
| Os05t0235600-00 | Rice | nucleus | 22.46 | 49.6 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 34.06 | 49.47 |
| Os06t0611700-00 | Rice | nucleus | 47.1 | 49.43 |
| KRH23302 | Soybean | nucleus | 57.61 | 47.75 |
| CDY65997 | Canola | nucleus | 14.49 | 47.06 |
| GSMUA_AchrUn_... | Banana | nucleus | 59.06 | 46.18 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 63.04 | 45.67 |
| GSMUA_Achr7P09020_001 | Banana | nucleus | 61.23 | 45.55 |
| KRH10020 | Soybean | nucleus | 60.14 | 45.36 |
| Os05t0539700-01 | Rice | nucleus | 59.42 | 45.05 |
| GSMUA_Achr6P00890_001 | Banana | nucleus | 60.14 | 44.86 |
| TraesCS1B01G377000.1 | Wheat | nucleus | 57.97 | 44.57 |
| KXG22431 | Sorghum | nucleus | 60.14 | 44.38 |
| CDY21663 | Canola | nucleus | 55.43 | 43.84 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 61.23 | 43.78 |
| CDX94372 | Canola | nucleus | 57.97 | 43.6 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 58.33 | 43.51 |
| TraesCS1D01G364900.1 | Wheat | nucleus | 57.61 | 43.44 |
| CDY50005 | Canola | nucleus | 55.07 | 43.3 |
| PGSC0003DMT400012517 | Potato | nucleus | 54.71 | 43.27 |
| CDX89363 | Canola | nucleus | 57.25 | 43.17 |
| PGSC0003DMT400021185 | Potato | nucleus | 51.09 | 43.12 |
| Zm00001d036177_P001 | Maize | nucleus | 57.25 | 43.05 |
| Solyc06g062690.2.1 | Tomato | nucleus | 54.35 | 42.98 |
| CDY67089 | Canola | nucleus | 57.97 | 42.67 |
| CDY69405 | Canola | nucleus | 57.25 | 42.47 |
| Zm00001d045352_P002 | Maize | extracellular, mitochondrion | 58.33 | 42.37 |
| OQU75826 | Sorghum | nucleus | 58.33 | 42.26 |
| CDY60738 | Canola | nucleus | 58.33 | 42.15 |
| CDY50468 | Canola | nucleus | 57.61 | 42.06 |
| Os06t0149400-01 | Rice | nucleus | 57.61 | 42.06 |
| CDX82688 | Canola | nucleus | 57.61 | 41.84 |
| GSMUA_Achr2P16760_001 | Banana | mitochondrion, nucleus | 60.87 | 41.38 |
| CDY50472 | Canola | nucleus | 55.8 | 41.18 |
| Solyc08g063000.2.1 | Tomato | nucleus | 52.17 | 40.91 |
| TraesCS7A01G102400.1 | Wheat | nucleus | 55.8 | 40.21 |
| TraesCS7D01G096300.1 | Wheat | nucleus | 55.43 | 40.05 |
| TraesCS1A01G360500.1 | Wheat | nucleus | 57.61 | 40.05 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 12.32 | 40.0 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 12.32 | 40.0 |
| TraesCS4A01G401100.1 | Wheat | nucleus | 55.07 | 39.79 |
| CDY50473 | Canola | nucleus | 26.81 | 39.36 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum | 59.42 | 38.59 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 11.59 | 38.55 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 56.16 | 37.62 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 12.68 | 33.65 |
| Zm00001d011130_P002 | Maize | nucleus | 51.45 | 33.57 |
| TraesCS3A01G357000.1 | Wheat | mitochondrion | 27.17 | 30.36 |
| CDX96698 | Canola | cytosol | 25.36 | 27.67 |
| CDX83813 | Canola | cytosol | 25.36 | 27.67 |
| CDY52429 | Canola | nucleus | 27.17 | 25.34 |
| CDY19242 | Canola | cytosol | 22.46 | 23.94 |
| CDY26724 | Canola | cytosol | 19.2 | 20.95 |
| HORVU7Hr1G111180.1 | Barley | cytosol | 2.9 | 17.02 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 12.32 | 13.99 |
Protein Annotations
| MapMan:12.2.6 | Gene3D:3.30.1120.90 | GO:A0A078E927 | EnsemblPlants:CDX97517 | ProteinID:CDX97517 | ProteinID:CDX97517.1 |
| ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006334 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00104724001 | InterPro:NAP-like_sf | InterPro:NAP_family |
| PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF99 | SUPFAM:SSF143113 | UniParc:UPI0004EDC4C8 | SEG:seg |
Description
BnaA05g25620D
Coordinates
chrLK031900:+:81042..82898
Molecular Weight (calculated)
31908.3 Da
IEP (calculated)
4.313
GRAVY (calculated)
-0.661
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNEENIMSI EAVHNSGGDS SDALVSKRVL FLKDIQVKHD ELEEKFLEEK AALEAKYDNL YKPLFDKRYE IVNGVAEAET EKGVPNFWLI AMKTNEMLAN
101: EITERDEGAL KYLKDIRCCR VENNSRNFKL EFLFDPNPYF KNSVLFKTYH VTDDDDDGPV LDKVIGTDIE WCPGKCLTHK VVVKKRPKKG TKKVNNIPMT
201: KTENCESFFN FFKPPEIDEV DECYTTMVEE LQNLTDQDYD IAVTIRDKLI PHAVSWFTGE ALVDEDEYND DDENDD
101: EITERDEGAL KYLKDIRCCR VENNSRNFKL EFLFDPNPYF KNSVLFKTYH VTDDDDDGPV LDKVIGTDIE WCPGKCLTHK VVVKKRPKKG TKKVNNIPMT
201: KTENCESFFN FFKPPEIDEV DECYTTMVEE LQNLTDQDYD IAVTIRDKLI PHAVSWFTGE ALVDEDEYND DDENDD
001: MSNEENIKSD NKSGDSSDLP TIPALDIGAE ECDLLAELKN LTLKRPFDVK KLSPKVTKRV LFLKDIQVTH DELEEKFLAE KSALEATYDN LYKPLFAKRY
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
101: EIVNGVVEAE AEKEGVPNFW LIAMKTNEML ANEITERDEA ALKYLKDIRS CRVEDTSRNF KLEFLFDSNL YFKNSVLSKT YHVNDEDGPV LEKVIGTDIE
201: WFPGKCLTHK VVVKKKTKKG PKKVNNIPMT KTENCESFFN FFKPPEIPEI DEVDDYDDFD TIMTEELQNL MDQDYDIAVT IRDKLIPHAV SWFTGEALVD
301: EDDSDDNDDD DNDEKSD
Arabidopsis Description
NAP1;4NFA4 [Source:UniProtKB/TrEMBL;Acc:A0A178VHH5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.