Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G018340.1 | Barley | cytosol | 19.15 | 31.03 |
| TraesCS1B01G377000.1 | Wheat | nucleus | 100.0 | 13.09 |
| TraesCS1D01G364900.1 | Wheat | nucleus | 100.0 | 12.84 |
| Os05t0539700-01 | Rice | nucleus | 95.74 | 12.36 |
| TraesCS1A01G360500.1 | Wheat | nucleus | 100.0 | 11.84 |
| Zm00001d038851_P001 | Maize | extracellular, mitochondrion | 89.36 | 11.35 |
| HORVU1Hr1G080060.11 | Barley | nucleus, plastid | 97.87 | 11.16 |
| KXG22431 | Sorghum | nucleus | 87.23 | 10.96 |
| Zm00001d011130_P002 | Maize | nucleus | 91.49 | 10.17 |
| KRH23302 | Soybean | nucleus | 59.57 | 8.41 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 68.09 | 8.4 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 68.09 | 8.29 |
| GSMUA_AchrUn_... | Banana | nucleus | 59.57 | 7.93 |
| KRH10020 | Soybean | nucleus | 59.57 | 7.65 |
| Solyc03g121700.2.1 | Tomato | nucleus | 59.57 | 7.53 |
| CDY23642 | Canola | nucleus | 29.79 | 4.76 |
| AT3G13782.2 | Thale cress | cytosol | 31.91 | 4.73 |
| HORVU2Hr1G033000.1 | Barley | cytosol | 17.02 | 3.29 |
| CDX97517 | Canola | nucleus | 17.02 | 2.9 |
| Bra027399.1-P | Field mustard | nucleus | 14.89 | 2.54 |
| HORVU2Hr1G066940.1 | Barley | nucleus | 4.26 | 2.41 |
| HORVU6Hr1G051930.1 | Barley | nucleus | 12.77 | 2.37 |
| HORVU4Hr1G081230.2 | Barley | nucleus | 2.13 | 0.96 |
| PGSC0003DMT400006378 | Potato | nucleus | 0.0 | 0.0 |
| HORVU7Hr1G064820.1 | Barley | nucleus | 0.0 | 0.0 |
| HORVU7Hr1G064790.1 | Barley | nucleus | 0.0 | 0.0 |
| HORVU1Hr1G078730.1 | Barley | nucleus | 0.0 | 0.0 |
| HORVU1Hr1G048890.1 | Barley | nucleus | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G111180.1 | EnsemblPlantsGene:HORVU7Hr1G111180 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:NAP_family | PANTHER:PTHR11875 |
| PANTHER:PTHR11875:SF98 | UniParc:UPI000B474D09 | UniProt:A0A287XU15 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:632673496..632673750
Molecular Weight (calculated)
5242.3 Da
IEP (calculated)
5.800
GRAVY (calculated)
-0.455
Length
47 amino acids
Sequence
(BLAST)
(BLAST)
1: AELSAEDKAN LVESIKNTLQ GLAARHTDVL ESLEPKVRKR VEALREI
001: MSNDKDSFNV SDLTAALKDE DRAGLVNALK NKLQNLAGQR SDVLENLTPN VRKRVDALRD IQSQHDELEA KFREERAILE AKYQTLYQPL YVKRYEIVNG
101: TTEVELAPED DTKVDQGEEK TAEEKGVPSF WLTALKNNDV ISEEVTERDE GALKYLKDIK WCKIEEPKGF KLEFFFDTNP YFKNTVLTKS YHMIDEDEPL
201: LEKAMGTEID WYPGKCLTQK ILKKKPKKGS KNTKPITKLE DCESFFNFFS PPEVPDEDED IDEERAEDLQ NLMEQDYDIG STIREKIIPR AVSWFTGEAM
301: EAEDFEIDDD EEDDIDEDED EEDEEDEEDD DDEDEEESKT KKKPSIGNKV CNLSELKFI
101: TTEVELAPED DTKVDQGEEK TAEEKGVPSF WLTALKNNDV ISEEVTERDE GALKYLKDIK WCKIEEPKGF KLEFFFDTNP YFKNTVLTKS YHMIDEDEPL
201: LEKAMGTEID WYPGKCLTQK ILKKKPKKGS KNTKPITKLE DCESFFNFFS PPEVPDEDED IDEERAEDLQ NLMEQDYDIG STIREKIIPR AVSWFTGEAM
301: EAEDFEIDDD EEDDIDEDED EEDEEDEEDD DDEDEEESKT KKKPSIGNKV CNLSELKFI
Arabidopsis Description
NAP1;1Nucleosome assembly protein 1;1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.