Factsheet for TraesCS1D01G364900.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G111180.1	Barley	cytosol	12.84	100.0
TraesCS1B01G377000.1	Wheat	nucleus	96.17	98.05
TraesCS1A01G360500.1	Wheat	nucleus	100.0	92.19
Os05t0539700-01	Rice	nucleus	88.8	89.29
Zm00001d038851_P001	Maize	extracellular, mitochondrion	83.88	82.97
KXG22431	Sorghum	nucleus	83.61	81.82
VIT_09s0002g02330.t01	Wine grape	nucleus	72.95	70.08
KRH23302	Soybean	nucleus	63.39	69.67
VIT_11s0016g02050.t01	Wine grape	nucleus	72.95	69.17
Solyc03g121700.2.1	Tomato	nucleus	69.67	68.55
PGSC0003DMT400006378	Potato	nucleus	46.45	67.73
TraesCS7D01G096300.1	Wheat	nucleus	69.67	66.75
KRH10020	Soybean	nucleus	66.12	66.12
GSMUA_AchrUn_...	Banana	nucleus	62.84	65.16
Zm00001d011130_P002	Maize	nucleus	69.67	60.28
CDX97517	Canola	nucleus	43.44	57.61
Bra027399.1-P	Field mustard	nucleus	43.44	57.61
CDY23642	Canola	nucleus	45.36	56.46
AT3G13782.2	Thale cress	cytosol	46.45	53.63
TraesCS2D01G323500.1	Wheat	cytosol	18.03	26.09
TraesCS6D01G185800.1	Wheat	golgi	16.94	24.7

Protein Annotations

EnsemblPlants:TraesCS1D01G364900.1	EnsemblPlantsGene:TraesCS1D01G364900	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf
InterPro:NAP_family	PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	PFAM:PF00956	SEG:seg	SUPFAM:SSF143113
MapMan:12.2.6	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:445542485..445545395

Molecular Weight (calculated)

41750.6 Da

IEP (calculated)

4.095

GRAVY (calculated)

-1.058

Length

366 amino acids

Sequence
(BLAST)

001: MSDGKDTLDL SALGAAVPNA AELSAEDKAN LVESIKNTLQ GLAARHTDVL ESLEPKVRKR VEALREIQSQ HDEFEAKFFE ERAALEAKYQ KMYEPLYSKR
101: HDVVNGVVEA EGVTKDSGEA APDEKEEKGV PDFWLNAMKN HEILAEEIQE RDEEALKYLK DIKWYRITEP KGFKLEFHFN TNPFFKNEVL SKTYHMIDED
201: EPILEKAIGT EIEWYPGKSL TQKVLKKKPK KGSKNTKPIT KIENCESFFN FFSPPQVPDD DEEIDEDTAE QLQNQMEQDY DIGSTIRDKI IPHAVSWFTG
301: EAAQDEDFDG IMDDDEDDDE DDEEDEDEDE DDEEDEDDDD GDKKKGGRVP AGEGQAGERP AECKQQ

Best Arabidopsis Sequence Match ( AT2G19480.3 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.