Factsheet for Zm00001d011130_P002

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G111180.1	Barley	cytosol	10.17	91.49
Zm00001d038851_P001	Maize	extracellular, mitochondrion	69.5	79.46
KXG22431	Sorghum	nucleus	67.85	76.74
Os05t0539700-01	Rice	nucleus	63.36	73.63
TraesCS1B01G377000.1	Wheat	nucleus	60.05	70.75
TraesCS1D01G364900.1	Wheat	nucleus	60.28	69.67
TraesCS1A01G360500.1	Wheat	nucleus	60.28	64.23
HORVU1Hr1G080060.11	Barley	nucleus, plastid	57.92	59.47
VIT_09s0002g02330.t01	Wine grape	nucleus	53.19	59.06
Solyc03g121700.2.1	Tomato	nucleus	51.06	58.06
GSMUA_AchrUn_...	Banana	nucleus	48.23	57.79
VIT_11s0016g02050.t01	Wine grape	nucleus	52.48	57.51
KRH23302	Soybean	nucleus	45.15	57.36
KRH10020	Soybean	nucleus	48.23	55.74
Zm00001d036177_P001	Maize	nucleus	47.99	55.31
Zm00001d045352_P002	Maize	extracellular, mitochondrion	49.41	55.0
PGSC0003DMT400006378	Potato	nucleus	31.68	53.39
CDX97517	Canola	nucleus	33.57	51.45
Bra027399.1-P	Field mustard	nucleus	33.33	51.09
CDY23642	Canola	nucleus	35.22	50.68
AT3G13782.2	Thale cress	cytosol	35.46	47.32
Zm00001d050874_P001	Maize	extracellular	13.71	23.11
Zm00001d016935_P001	Maize	extracellular	13.71	22.48

Protein Annotations

EntrezGene:100279994	MapMan:12.2.6	Gene3D:3.30.1120.90	UniProt:A0A1D6FWR6	ProteinID:AQK95816.1	ncoils:Coil
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150
GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf	InterPro:NAP_family	PFAM:PF00956	PANTHER:PTHR11875
PANTHER:PTHR11875:SF98	SUPFAM:SSF143113	UniParc:UPI000843C313	EnsemblPlantsGene:Zm00001d011130	EnsemblPlants:Zm00001d011130_P002	EnsemblPlants:Zm00001d011130_T002
SEG:seg	:	:	:	:	:

Description

Nucleosome assembly protein 1;2

Coordinates

chr8:+:139920304..139924408

Molecular Weight (calculated)

48304.9 Da

IEP (calculated)

4.466

GRAVY (calculated)

-0.469

Length

423 amino acids

Sequence
(BLAST)

001: MSDGKDSLDL SALGAAIPNS AELSAEDKAN LVASIKNTLE GLASRHTDVL ESLEPKVRKR VEKLREIQGE HDELEAKFFE ERAALEAKYQ KLYEPLYSKR
101: YEIVNGVVEV EGITVESAAE TPAEQKTGDE TSADQKEEKG VPAFWLNAMK NHEILAEEIQ ERDEEALKYL KNITWYRISE PKGFKLEFQF GTNPFFKNSV
201: LTKTYHMIDE DEPILEKAIG TEIEWYPGKC LTQKVLKKKP RKGSKNTKPI TKTEDCESFF NFFSPPQVPD DDEEIDEDIA EQLQNEMEQD YDIGRPRELP
301: EGKGSRANDL QSASSSEVLH NECWQALFVE QLVWFCLMLK VIELVCGTFE GALVGFMELV GEFFWDMALY HYMWVVSSLS VLGFRYYMCS YAWSEDGCHS
401: GMSYCAYHWH SVLSVLSSSV PCR

Best Arabidopsis Sequence Match ( AT2G19480.1 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.