Factsheet for HORVU1Hr1G018340.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G017740.1
HORVU1Hr1G018340.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G19480.1	HORVU1Hr1G018340.1	AT2G19480.1	19228338
AT2G19480.1	HORVU0Hr1G017740.1	AT2G45860.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G111180.1	Barley	cytosol	31.03	19.15
VIT_09s0002g02330.t01	Wine grape	nucleus	58.62	4.46
VIT_11s0016g02050.t01	Wine grape	nucleus	48.28	3.63
Bra040674.1-P	Field mustard	nucleus	44.83	3.46
CDY60738	Canola	nucleus	44.83	3.4
Bra036720.1-P	Field mustard	nucleus	41.38	3.25
CDY67089	Canola	nucleus	41.38	3.2
CDX82688	Canola	nucleus	41.38	3.16
CDY69405	Canola	nucleus	37.93	2.96
Solyc05g018810.2.1	Tomato	nucleus	37.93	2.93
HORVU1Hr1G080060.11	Barley	nucleus, plastid	41.38	2.91
CDY21663	Canola	nucleus	34.48	2.87
PGSC0003DMT400000751	Potato	nucleus	34.48	2.7
Solyc12g008940.1.1	Tomato	nucleus	34.48	2.67
PGSC0003DMT400055114	Potato	nucleus	34.48	2.67
Bra031083.1-P	Field mustard	nucleus	34.48	2.64
AT2G19480.1	Thale cress	nucleus	34.48	2.64
HORVU2Hr1G066940.1	Barley	nucleus	6.9	2.41
KRH19202	Soybean	nucleus	27.59	2.13
KRH02690	Soybean	nucleus	27.59	2.11
KRH12415	Soybean	endoplasmic reticulum	20.69	1.65
KRH37411	Soybean	nucleus	20.69	1.64
HORVU2Hr1G033000.1	Barley	cytosol	10.34	1.23
HORVU6Hr1G051930.1	Barley	nucleus	6.9	0.79
Bra006957.1-P	Field mustard	nucleus	3.45	0.44
HORVU7Hr1G064820.1	Barley	nucleus	0.0	0.0
HORVU7Hr1G064790.1	Barley	nucleus	0.0	0.0
HORVU4Hr1G081230.2	Barley	nucleus	0.0	0.0
HORVU1Hr1G078730.1	Barley	nucleus	0.0	0.0
HORVU1Hr1G048890.1	Barley	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU1Hr1G018340.1

EnsemblPlantsGene:HORVU1Hr1G018340

UniParc:UPI000B47876F

UniProt:A0A287ESM3

MapMan:35.2

Description

No Description!

Coordinates

chrchr1H:-:66924826..66925035

Molecular Weight (calculated)

2861.3 Da

IEP (calculated)

3.787

GRAVY (calculated)

-0.134

Length

29 amino acids

Sequence
(BLAST)

1: MSDGKDTLDL SALGAAVPNA AELSAEDKA

Best Arabidopsis Sequence Match ( AT3G44710.1 )
(BLAST)

001: MNPREEAKRG NNDEDNGGIV VEEPHDLFSR ESALPKLLRE SAGGKKCCIF KISHKPENKK YKAAYEPRVV SLGPYHHGKK NLQMIEEHKL RFLKIFMDEA
101: KRKGVDTNGL IKAVSVLEED IRDSYSESLY SDGKKLIEMM VLDGCFILMI FLVVAGVVSH SEIENDPIFA IPWILPAIRN DLILLENQVP FFLLQTIFDR
201: SKIEKSSGLN EIIFHFFNYS LQKSNTFWLK HQKVEANHLL DLIRNIYMPD VPKEEKKSNH LLDCMMIRKI CMPRESKQEL DVMLKKGKQE VDISMLEEGI
301: PKSDSLEEED STTGRHHLKM VLSARKLQLK GIKFKARKKA ETLMDIRHKG KLLQIPPLIL DDFLIAVLLN CVAFEQYYSY CTKQHMTSYV AFMGCLLKSE
401: ADAMFLSEVG ILENYFGSGD EVSRFFKVVG KDVLFDIDES YLAGIFEGVN KYTSSGWHVQ WAGFKHTHFD SPWTALSSCA ALTLVILTII QAFFAAYGYF
501: HPPK

Arabidopsis Description

At3g44710 [Source:UniProtKB/TrEMBL;Acc:Q9M1N3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.