Factsheet for AT2G19480.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67089	Canola	nucleus	88.13	89.07
CDY69405	Canola	nucleus	87.34	88.98
Bra036720.1-P	Field mustard	nucleus	86.54	88.89
CDX82688	Canola	nucleus	87.86	87.63
Bra040674.1-P	Field mustard	nucleus	86.28	86.97
CDY60738	Canola	nucleus	87.6	86.91
CDY21663	Canola	nucleus	79.42	86.25
Bra031083.1-P	Field mustard	nucleus	78.89	78.89
AT4G26110.1	Thale cress	nucleus	74.67	76.08
AT5G56950.1	Thale cress	nucleus	74.93	75.94
VIT_09s0002g02330.t01	Wine grape	nucleus	75.73	75.33
VIT_11s0016g02050.t01	Wine grape	nucleus	74.67	73.32
Bra006957.1-P	Field mustard	nucleus	40.63	67.84
AT3G13782.2	Thale cress	cytosol	44.85	53.63
HORVU1Hr1G018340.1	Barley	cytosol	2.64	34.48
AT1G18800.1	Thale cress	cytosol	20.58	30.47
AT1G74560.3	Thale cress	cytosol	17.15	24.62

Protein Annotations

MapMan:12.2.6	Gene3D:3.30.1120.90	EntrezGene:816467	ProteinID:AAD10147.1	ProteinID:AEC06885.1	EMBL:AK316769
ArrayExpress:AT2G19480	EnsemblPlantsGene:AT2G19480	RefSeq:AT2G19480	TAIR:AT2G19480	RefSeq:AT2G19480-TAIR-G	EnsemblPlants:AT2G19480.1
TAIR:AT2G19480.1	EMBL:AY099771	Unigene:At.24848	EMBL:BT002602	ncoils:Coil	GO:GO:0000724
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0005886	GO:GO:0006139	GO:GO:0006259
GO:GO:0006334	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152	GO:GO:0009294	GO:GO:0009987
GO:GO:0016020	GO:GO:0016043	GO:GO:0016444	GO:GO:0042393	GO:GO:0042802	GO:GO:0046686
InterPro:NAP-like_sf	Symbol:NAP1;2	InterPro:NAP_family	Symbol:NFA02	RefSeq:NP_179538.1	PFAM:PF00956
PO:PO:0000003	PO:PO:0000005	PO:PO:0000013	PO:PO:0000037	PO:PO:0000084	PO:PO:0000230
PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001054	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095	PO:PO:0007098	PO:PO:0007103
PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030
PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030
PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281
PANTHER:PTHR11875	PANTHER:PTHR11875:SF101	UniProt:Q9ZUP3	SUPFAM:SSF143113	UniParc:UPI00000AC55A	SEG:seg

Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]

Coordinates

chr2:+:8438456..8441501

Molecular Weight (calculated)

43544.6 Da

IEP (calculated)

4.058

GRAVY (calculated)

-1.130

Length

379 amino acids

Sequence
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.