Factsheet for HORVU2Hr1G033000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G078730.1	Barley	nucleus	12.35	51.72
HORVU2Hr1G066940.1	Barley	nucleus	12.76	37.35
HORVU7Hr1G064820.1	Barley	nucleus	12.76	36.47
HORVU7Hr1G064790.1	Barley	nucleus	12.76	36.47
HORVU4Hr1G081230.2	Barley	nucleus	13.17	30.77
HORVU1Hr1G048890.1	Barley	nucleus	15.23	19.47
HORVU7Hr1G111180.1	Barley	cytosol	3.29	17.02
GSMUA_Achr6P00890_001	Banana	nucleus	23.05	15.14
GSMUA_Achr7P09020_001	Banana	nucleus	23.05	15.09
Os06t0149400-01	Rice	nucleus	23.46	15.08
Zm00001d036177_P001	Maize	nucleus	22.22	14.71
OQU75826	Sorghum	nucleus	23.05	14.7
TraesCS7D01G096300.1	Wheat	nucleus	23.05	14.66
TraesCS4A01G401100.1	Wheat	nucleus	23.05	14.66
Zm00001d045352_P002	Maize	extracellular, mitochondrion	22.63	14.47
VIT_09s0002g02330.t01	Wine grape	nucleus	22.63	14.44
TraesCS7A01G102400.1	Wheat	nucleus	22.63	14.36
Solyc03g121700.2.1	Tomato	nucleus	21.81	14.25
VIT_11s0016g02050.t01	Wine grape	nucleus	22.22	13.99
GSMUA_Achr10P...	Banana	endoplasmic reticulum	24.28	13.88
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	23.05	13.79
TraesCS3A01G357000.1	Wheat	mitochondrion	13.99	13.77
KRH10020	Soybean	nucleus	20.16	13.39
Bra027399.1-P	Field mustard	nucleus	13.99	12.32
CDX97517	Canola	nucleus	13.99	12.32
HORVU1Hr1G080060.11	Barley	nucleus, plastid	20.58	12.14
CDY23642	Canola	nucleus	14.4	11.9
AT3G13782.2	Thale cress	cytosol	14.81	11.36
KRH23302	Soybean	nucleus	15.23	11.11
HORVU1Hr1G018340.1	Barley	cytosol	1.23	10.34
HORVU6Hr1G051930.1	Barley	nucleus	5.76	5.53
PGSC0003DMT400006378	Potato	nucleus	2.06	1.99

Protein Annotations

EnsemblPlants:HORVU2Hr1G033000.1	EnsemblPlantsGene:HORVU2Hr1G033000	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634
GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf	InterPro:NAP_family
PANTHER:PTHR11875	PANTHER:PTHR11875:SF101	SEG:seg	SUPFAM:SSF143113	UniParc:UPI000B47F22C	UniProt:A0A287HMC2
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:+:130666824..130676143

Molecular Weight (calculated)

19869.2 Da

IEP (calculated)

9.007

GRAVY (calculated)

-0.241

Length

243 amino acids

Sequence
(BLAST)

001: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXPTPRHHRP LPPAAPGPPV LLRHRPGVDA PPHVAPHHRQ
101: PSGIPARESA IGRDRFFRLV PGVGLGMILG VVPLVPLQEE AGPAARCEIC GSGEKKLYVF TCIQCNGCQH RANMMRLKGS FFEERAALGA KYQKLYEPLY
201: TKRYNIVNRV VEVDGVAQEP TNENVAEGEI QMLKESQISG SLL

Best Arabidopsis Sequence Match ( AT2G19480.3 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KAGRSQLAEG QAGERPPECK QQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.