Factsheet for GSMUA_Achr7P09020_001

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P00890_001	Banana	nucleus	84.37	84.59
GSMUA_Achr10P...	Banana	endoplasmic reticulum	89.22	77.88
GSMUA_Achr2P16760_001	Banana	mitochondrion, nucleus	84.64	77.34
VIT_09s0002g02330.t01	Wine grape	nucleus	77.09	75.07
PGSC0003DMT400006378	Potato	nucleus	50.4	74.5
HORVU1Hr1G048890.1	Barley	nucleus	37.47	73.16
Os06t0149400-01	Rice	nucleus	74.39	73.02
Solyc03g121700.2.1	Tomato	nucleus	72.78	72.58
VIT_11s0016g02050.t01	Wine grape	nucleus	75.47	72.54
KRH23302	Soybean	nucleus	64.69	72.07
Zm00001d045352_P002	Maize	extracellular, mitochondrion	73.32	71.58
OQU75826	Sorghum	nucleus	73.05	71.13
TraesCS7A01G102400.1	Wheat	nucleus	72.24	69.97
KRH10020	Soybean	nucleus	69.0	69.95
TraesCS7D01G096300.1	Wheat	nucleus	71.43	69.37
TraesCS4A01G401100.1	Wheat	nucleus	70.89	68.85
Zm00001d036177_P001	Maize	nucleus	67.92	68.66
GSMUA_AchrUn_...	Banana	nucleus	64.15	67.42
HORVU7Hr1G064790.1	Barley	nucleus	14.29	62.35
HORVU7Hr1G064820.1	Barley	nucleus	14.29	62.35
CDX97517	Canola	nucleus	45.55	61.23
Bra027399.1-P	Field mustard	nucleus	45.28	60.87
CDY23642	Canola	nucleus	47.71	60.2
AT3G13782.2	Thale cress	cytosol	48.79	57.1
HORVU2Hr1G066940.1	Barley	nucleus	11.86	53.01
HORVU4Hr1G081230.2	Barley	nucleus	14.02	50.0
TraesCS3A01G357000.1	Wheat	mitochondrion	32.08	48.18
GSMUA_Achr6P10690_001	Banana	nucleus	21.29	30.98
GSMUA_Achr10P...	Banana	nucleus	21.02	30.35
GSMUA_Achr4P00490_001	Banana	cytosol	20.49	29.69
GSMUA_Achr7P21000_001	Banana	cytosol	19.68	28.97
HORVU2Hr1G033000.1	Barley	cytosol	15.09	23.05

Protein Annotations

EnsemblPlants:GSMUA_Achr7P09020_001	EnsemblPlants:GSMUA_Achr7T09020_001	EnsemblPlantsGene:GSMUA_Achr7G09020_001	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:NAP-like_sf	InterPro:NAP_family	PANTHER:PTHR11875	PANTHER:PTHR11875:SF98	PFAM:PF00956	SEG:seg
SUPFAM:SSF143113	UniParc:UPI0002957A5E	UniProt:M0TFZ0	MapMan:12.2.6	:	:

Description

NAP domain containing protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr7G09020_001]

Coordinates

chr7:+:7378585..7382776

Molecular Weight (calculated)

42632.8 Da

IEP (calculated)

4.089

GRAVY (calculated)

-1.069

Length

371 amino acids

Sequence
(BLAST)

001: MSKDKQQDSV NLADLGAALS EEDRAGLVNA LKNKLQSLAG KHTDVLETLR PAVRKRVDVL REIQSQHDEL EAKFFEERAA LEAKYQKLYE PLYVKRYEIV
101: NGVVEVEGVK DEPTEETPSE DKASEEKGVP GFWLTAMKTN EVLAEEIQER DEEALKYLKD IKWCRIDDPK GFKLEFFFDP NPYFKNTVLT KTYHMIDEDE
201: PILEKAIGTE IEWFPGKCLT QKILKKKPKK GSKNAKPITK TEDCESFFNF FNPPEVPDDD ADIDEETAEQ LQSQMEVDYD IGSTIKDKII PHAVSWFTGE
301: AVQDDDELEI EEEDDEEEDD DEEEEEDEDD DDDEDEDEDE EEQTKTKKKS ATGHKKSGGE QADRPAECKQ Q

Best Arabidopsis Sequence Match ( AT2G19480.1 )
(BLAST)

001: MSNDKDSMNM SDLSTALNEE DRAGLVNALK NKLQNLAGQH SDVLENLTPP VRKRVEFLRE IQNQYDEMEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: VVEVEGAAEE VKSEQGEDKS AEEKGVPDFW LIALKNNEIT AEEITERDEG ALKYLKDIKW SRVEEPKGFK LEFFFDQNPY FKNTVLTKTY HMIDEDEPIL
201: EKALGTEIEW YPGKCLTQKI LKKKPKKGSK NTKPITKTED CESFFNFFSP PQVPDDDEDL DDDMADELQG QMEHDYDIGS TIKEKIISHA VSWFTGEAVE
301: ADDLDIEDDD DEIDEDDDEE DEEDDEDDEE EDDEDDDEEE EADQGKKSKK KSSAGHKKAG RSQLAEGQAG ERPPECKQQ

Arabidopsis Description

NAP1;2Nucleosome assembly protein 1;2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUP3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.