Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19202 | Soybean | nucleus | 94.72 | 95.73 |
| KRH12415 | Soybean | endoplasmic reticulum | 74.14 | 77.41 |
| KRH37411 | Soybean | nucleus | 74.14 | 76.99 |
| VIT_11s0016g02050.t01 | Wine grape | nucleus | 75.2 | 73.83 |
| Solyc12g008940.1.1 | Tomato | nucleus | 72.82 | 73.8 |
| VIT_09s0002g02330.t01 | Wine grape | nucleus | 74.14 | 73.75 |
| PGSC0003DMT400000751 | Potato | nucleus | 70.98 | 72.7 |
| PGSC0003DMT400055114 | Potato | nucleus | 69.39 | 70.32 |
| CDY50468 | Canola | nucleus | 69.92 | 70.11 |
| AT5G56950.1 | Thale cress | nucleus | 69.13 | 70.05 |
| Solyc05g018810.2.1 | Tomato | nucleus | 69.39 | 69.95 |
| AT4G26110.1 | Thale cress | nucleus | 68.34 | 69.62 |
| KRH23302 | Soybean | nucleus | 60.95 | 69.37 |
| CDY50472 | Canola | nucleus | 67.81 | 68.72 |
| CDX89363 | Canola | nucleus | 66.23 | 68.58 |
| Bra013951.1-P | Field mustard | nucleus | 65.96 | 68.31 |
| CDX94372 | Canola | nucleus | 65.7 | 67.85 |
| CDY50473 | Canola | nucleus | 33.51 | 67.55 |
| CDY50005 | Canola | nucleus | 62.53 | 67.52 |
| KRH10020 | Soybean | nucleus | 64.38 | 66.67 |
| CDY65997 | Canola | nucleus | 13.98 | 62.35 |
| Bra002778.1-P | Field mustard | nucleus | 64.64 | 59.04 |
| CDY52429 | Canola | nucleus | 30.08 | 38.51 |
| KRH65521 | Soybean | cytosol | 8.44 | 32.0 |
| KRH63352 | Soybean | nucleus | 21.37 | 30.92 |
| KRH65520 | Soybean | nucleus | 8.97 | 30.91 |
| KRH54545 | Soybean | nucleus | 21.11 | 30.3 |
| KRH16731 | Soybean | cytosol, mitochondrion, nucleus | 6.6 | 28.74 |
| KRH75776 | Soybean | cytosol | 7.12 | 28.42 |
| HORVU1Hr1G018340.1 | Barley | cytosol | 2.11 | 27.59 |
| KRH03467 | Soybean | nucleus | 18.47 | 27.13 |
| KRH56918 | Soybean | nucleus | 17.94 | 26.56 |
| KRH49525 | Soybean | cytosol | 9.5 | 21.95 |
Protein Annotations
| EntrezGene:100818687 | MapMan:12.2.6 | Gene3D:3.30.1120.90 | UniProt:A0A0R0FHA5 | EMBL:ACUP02010313 | EnsemblPlantsGene:GLYMA_17G053800 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 |
| GO:GO:0009987 | GO:GO:0016043 | EnsemblPlants:KRH02690 | ProteinID:KRH02690 | ProteinID:KRH02690.1 | InterPro:NAP-like_sf |
| InterPro:NAP_family | PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF101 | SUPFAM:SSF143113 | UniParc:UPI0006EDB461 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:4094687..4098037
Molecular Weight (calculated)
43568.7 Da
IEP (calculated)
4.109
GRAVY (calculated)
-0.987
Length
379 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNDKDTFNV ADLTSALNED NRADLVNALK SKIQSLAGQH SDILESLSPN VRKRVEVLRE IQGQHDELEA KFFEERAALE AKYQKLYQPL YTKRYEIVNG
101: TTEVEEGAVK ETAPDNEEDQ EKGVPAFWLT AMKNNEVLAE EISERDEGAL KYLKDIKWSR IENPKGFKLD FFFDTNPYFT NSVLTKTYHM IDEDEPILEK
201: AIGTEIQWHP GKCLTQKILK KKPKKGSKNA KPITKTENCE SFFNFFNPPQ VPEDDEDIDE DVAEELQNQM EQDYDIGSTI RDKIIPHAVS WFTGEAIQGD
301: EFGDLEDDED DEDIEEDDDE DEEDDDDDDD DDDDEEESKT KKKHLRRVEE HNLVMASRVS DLQSASSSRS IYAECHLCS
101: TTEVEEGAVK ETAPDNEEDQ EKGVPAFWLT AMKNNEVLAE EISERDEGAL KYLKDIKWSR IENPKGFKLD FFFDTNPYFT NSVLTKTYHM IDEDEPILEK
201: AIGTEIQWHP GKCLTQKILK KKPKKGSKNA KPITKTENCE SFFNFFNPPQ VPEDDEDIDE DVAEELQNQM EQDYDIGSTI RDKIIPHAVS WFTGEAIQGD
301: EFGDLEDDED DEDIEEDDDE DEEDDDDDDD DDDDEEESKT KKKHLRRVEE HNLVMASRVS DLQSASSSRS IYAECHLCS
001: MSNDKDSFNV SDLTAALKDE DRAGLVNALK NKLQNLAGQR SDVLENLTPN VRKRVDALRD IQSQHDELEA KFREERAILE AKYQTLYQPL YVKRYEIVNG
101: TTEVELAPED DTKVDQGEEK TAEEKGVPSF WLTALKNNDV ISEEVTERDE GALKYLKDIK WCKIEEPKGF KLEFFFDTNP YFKNTVLTKS YHMIDEDEPL
201: LEKAMGTEID WYPGKCLTQK ILKKKPKKGS KNTKPITKLE DCESFFNFFS PPEVPDEDED IDEERAEDLQ NLMEQDYDIG STIREKIIPR AVSWFTGEAM
301: EAEDFEIDDD EEDDIDEDED EEDEEDEEDD DDEDEEESKT KKKPSIGNKV CNLSELKFI
101: TTEVELAPED DTKVDQGEEK TAEEKGVPSF WLTALKNNDV ISEEVTERDE GALKYLKDIK WCKIEEPKGF KLEFFFDTNP YFKNTVLTKS YHMIDEDEPL
201: LEKAMGTEID WYPGKCLTQK ILKKKPKKGS KNTKPITKLE DCESFFNFFS PPEVPDEDED IDEERAEDLQ NLMEQDYDIG STIREKIIPR AVSWFTGEAM
301: EAEDFEIDDD EEDDIDEDED EEDEEDEEDD DDEDEEESKT KKKPSIGNKV CNLSELKFI
Arabidopsis Description
NAP1;1Nucleosome assembly protein 1;1 [Source:UniProtKB/Swiss-Prot;Acc:Q9SZI2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.