Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83813 | Canola | cytosol | 76.83 | 78.66 |
| CDX96698 | Canola | cytosol | 76.06 | 77.87 |
| KRH16731 | Soybean | cytosol, mitochondrion, nucleus | 25.1 | 74.71 |
| Solyc12g077660.1.1 | Tomato | cytosol | 18.15 | 74.6 |
| KRH65521 | Soybean | cytosol | 28.57 | 74.0 |
| CDY26724 | Canola | cytosol | 71.81 | 73.52 |
| AT1G74560.3 | Thale cress | cytosol | 67.95 | 66.67 |
| KRH65520 | Soybean | nucleus | 27.8 | 65.45 |
| KRH75776 | Soybean | cytosol | 23.55 | 64.21 |
| KRH63352 | Soybean | nucleus | 64.09 | 63.36 |
| KRH54545 | Soybean | nucleus | 64.09 | 62.88 |
| KRH56918 | Soybean | nucleus | 61.0 | 61.72 |
| KRH03467 | Soybean | nucleus | 61.39 | 61.63 |
| VIT_17s0000g06030.t01 | Wine grape | cytosol | 62.16 | 60.07 |
| GSMUA_Achr10P... | Banana | nucleus | 57.53 | 57.98 |
| TraesCS6B01G227700.1 | Wheat | nucleus | 55.6 | 57.37 |
| HORVU6Hr1G051930.1 | Barley | nucleus | 55.98 | 57.31 |
| TraesCS6A01G202200.1 | Wheat | nucleus | 55.21 | 56.97 |
| TraesCS6D01G185800.1 | Wheat | golgi | 55.21 | 56.97 |
| Solyc06g069890.2.1 | Tomato | nucleus | 57.14 | 56.7 |
| Solyc03g116170.2.1 | Tomato | cytosol | 55.21 | 56.52 |
| PGSC0003DMT400083149 | Potato | cytosol | 56.76 | 56.32 |
| Os02t0576700-01 | Rice | extracellular | 54.44 | 55.95 |
| GSMUA_Achr6P10690_001 | Banana | nucleus | 54.83 | 55.69 |
| EES07035 | Sorghum | cytosol | 53.67 | 55.38 |
| GSMUA_Achr7P21000_001 | Banana | cytosol | 53.28 | 54.76 |
| GSMUA_Achr4P00490_001 | Banana | cytosol | 54.05 | 54.69 |
| Solyc12g077670.1.1 | Tomato | cytosol | 19.3 | 54.35 |
| Zm00001d050874_P001 | Maize | extracellular | 52.51 | 54.18 |
| Zm00001d016935_P001 | Maize | extracellular | 53.28 | 53.49 |
| TraesCS2D01G323500.1 | Wheat | cytosol | 49.81 | 50.99 |
| TraesCS2B01G342400.1 | Wheat | cytosol | 49.81 | 50.99 |
| TraesCS2A01G344900.1 | Wheat | cytosol | 49.42 | 50.59 |
| PGSC0003DMT400050243 | Potato | nucleus | 52.9 | 48.24 |
| Os04t0459700-02 | Rice | nucleus | 47.49 | 47.49 |
| KRH49525 | Soybean | cytosol | 29.34 | 46.34 |
| EES12291 | Sorghum | cytosol | 45.56 | 45.91 |
| CDX97517 | Canola | nucleus | 23.94 | 22.46 |
| CDY65997 | Canola | nucleus | 7.34 | 22.35 |
| CDX89363 | Canola | nucleus | 29.73 | 21.04 |
| CDY23642 | Canola | nucleus | 23.17 | 20.41 |
| CDX82688 | Canola | nucleus | 28.96 | 19.74 |
| CDY50468 | Canola | nucleus | 28.57 | 19.58 |
| CDY50005 | Canola | nucleus | 26.25 | 19.37 |
| CDY60738 | Canola | nucleus | 28.57 | 19.37 |
| CDX94372 | Canola | nucleus | 27.41 | 19.35 |
| CDY21663 | Canola | nucleus | 25.87 | 19.2 |
| CDY50472 | Canola | nucleus | 27.41 | 18.98 |
| CDY69405 | Canola | nucleus | 26.25 | 18.28 |
| CDY67089 | Canola | nucleus | 26.25 | 18.13 |
| CDY50473 | Canola | nucleus | 11.97 | 16.49 |
| CDY52429 | Canola | nucleus | 10.81 | 9.46 |
Protein Annotations
| MapMan:12.2.8 | Gene3D:3.30.1120.90 | GO:A0A078G2I8 | UniProt:A0A078G2I8 | EnsemblPlants:CDY19242 | ProteinID:CDY19242 |
| ProteinID:CDY19242.1 | ncoils:Coil | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | EnsemblPlantsGene:GSBRNA2T00006550001 | InterPro:NAP-like_sf |
| InterPro:NAP_family | PFAM:PF00956 | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF60 | SUPFAM:SSF143113 | UniParc:UPI0004EEB721 |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g14430DBnaC05g14430D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2I8]
Coordinates
chrLK032093:-:534896..537945
Molecular Weight (calculated)
30001.3 Da
IEP (calculated)
4.250
GRAVY (calculated)
-0.848
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MVADKSKKAK IEEENVEQID GELVLSIETL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KAIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDHFNPNPYF EDEKLTKTFT FLEEGTTKIT ATPIKWKEGK GLPNGVNHEK NGNKRALPEE SFFTWFSDAQ HKEDLDVEIN DESNIIRLRM
201: SSRKIYGPTL SPTSTMRLMK RILMKMMMMM MMMNDDDDEE GKEGDSGEDD DEDDKDGEE
101: YLSSLDVEDA KDHFNPNPYF EDEKLTKTFT FLEEGTTKIT ATPIKWKEGK GLPNGVNHEK NGNKRALPEE SFFTWFSDAQ HKEDLDVEIN DESNIIRLRM
201: SSRKIYGPTL SPTSTMRLMK RILMKMMMMM MMMNDDDDEE GKEGDSGEDD DEDDKDGEE
001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE
Arabidopsis Description
NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.