Factsheet for Os02t0576700-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

nucleus 4
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

extracellular: 19038476

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os03t0262900-02

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18800.1	Os03t0262900-02	AT5G09320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G202200.1	Wheat	nucleus	90.87	91.24
TraesCS6D01G185800.1	Wheat	golgi	90.87	91.24
TraesCS6B01G227700.1	Wheat	nucleus	90.48	90.84
HORVU6Hr1G051930.1	Barley	nucleus	88.89	88.54
EES07035	Sorghum	cytosol	82.54	82.87
Zm00001d050874_P001	Maize	extracellular	80.56	80.88
Zm00001d016935_P001	Maize	extracellular	79.76	77.91
GSMUA_Achr10P...	Banana	nucleus	67.86	66.54
KRH16731	Soybean	cytosol, mitochondrion, nucleus	22.62	65.52
GSMUA_Achr6P10690_001	Banana	nucleus	65.87	65.1
GSMUA_Achr7P21000_001	Banana	cytosol	65.08	65.08
Os04t0459700-02	Rice	nucleus	66.67	64.86
GSMUA_Achr4P00490_001	Banana	cytosol	65.87	64.84
VIT_14s0108g00510.t01	Wine grape	cytosol	63.1	64.63
AT1G18800.1	Thale cress	cytosol	65.08	64.06
CDX83813	Canola	cytosol	64.29	64.03
CDX96698	Canola	cytosol	63.89	63.64
Bra016541.1-P	Field mustard	cytosol	57.54	61.97
Solyc02g067370.2.1	Tomato	nucleus	59.92	59.45
PGSC0003DMT400017852	Potato	cytosol	59.92	59.22
KRH63352	Soybean	nucleus	61.51	59.16
KRH65521	Soybean	cytosol	23.41	59.0
KRH54545	Soybean	nucleus	61.51	58.71
KRH03467	Soybean	nucleus	59.92	58.53
KRH56918	Soybean	nucleus	58.33	57.42
CDY26724	Canola	cytosol	56.35	56.13
AT1G74560.3	Thale cress	cytosol	57.94	55.3
KRH75776	Soybean	cytosol	20.63	54.74
KRH65520	Soybean	nucleus	23.81	54.55
CDY19242	Canola	cytosol	55.95	54.44
Bra025687.1-P	Field mustard	cytosol	50.0	54.08
KRH49525	Soybean	cytosol	25.4	39.02
Os01t0711800-00	Rice	nucleus	24.21	20.54
Os06t0611700-00	Rice	nucleus	20.63	19.77
Os06t0149400-01	Rice	nucleus	28.57	19.05
Os05t0539700-01	Rice	nucleus	25.79	17.86
Os05t0235600-00	Rice	nucleus	7.54	15.2

Protein Annotations

MapMan:12.2.8	Gene3D:3.30.1120.90	EntrezGene:4329757	EMBL:AK059578	EMBL:AK102294	ProteinID:BAD34250.1
ProteinID:BAF09132.1	ProteinID:BAS79386.1	ncoils:Coil	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0005737	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:NAP-like_sf	InterPro:NAP_family	EnsemblPlantsGene:Os02g0576700	EnsemblPlants:Os02t0576700-01	PFAM:PF00956	PANTHER:PTHR11875
PANTHER:PTHR11875:SF68	UniProt:Q69JW2	SUPFAM:SSF143113	UniParc:UPI000035AFD1	RefSeq:XP_015627496.1	SEG:seg

Description

OsNAPL6Nucleosome assembly protein (NAP) family protein, H3/H4 histone chaperone, Abiotic stress response and adaptation (Os02t0576700-01)

Coordinates

chr2:-:22151598..22156041

Molecular Weight (calculated)

28589.5 Da

IEP (calculated)

3.949

GRAVY (calculated)

-0.862

Length

252 amino acids

Sequence
(BLAST)

001: MTAPADKGKK AKTDADGGAA EENEQIDGAL VLSIEKLQEI QDELEKVNEE ASDKVLEVEQ KYSEIRRPVY LRRSDVIQTI PDFWLTAFLS HPLLSELLTE
101: EDQKMFKYLE SVDVDDSKDV KSGYSITLTF SENPYFEDKE LTKTYAFADD GTTTINATSI KWKEGMEIAN GNAKKKGSKR PLVEESFFTW FTDTEHKSLA
201: DGVQDEVAEI IKEDLWPNPL KYFNNEAEEL GEDDDEEGSD ADEGEEDEEE EN

Best Arabidopsis Sequence Match ( AT1G18800.1 )
(BLAST)

001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE

Arabidopsis Description

NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.