Factsheet for Bra025687.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH65521	Soybean	cytosol	31.76	74.0
Solyc12g077660.1.1	Tomato	cytosol	19.74	73.02
KRH16731	Soybean	cytosol, mitochondrion, nucleus	27.04	72.41
KRH75776	Soybean	cytosol	29.18	71.58
CDY26724	Canola	cytosol	73.82	67.98
Bra016541.1-P	Field mustard	cytosol	67.81	67.52
KRH65520	Soybean	nucleus	30.9	65.45
AT1G74560.3	Thale cress	cytosol	66.95	59.09
Solyc12g077670.1.1	Tomato	cytosol	22.75	57.61
KRH54545	Soybean	nucleus	63.95	56.44
KRH63352	Soybean	nucleus	63.09	56.11
KRH03467	Soybean	nucleus	60.52	54.65
KRH56918	Soybean	nucleus	59.23	53.91
VIT_17s0000g06030.t01	Wine grape	cytosol	61.37	53.36
GSMUA_Achr10P...	Banana	nucleus	57.51	52.14
Solyc06g069890.2.1	Tomato	nucleus	56.65	50.57
GSMUA_Achr7P21000_001	Banana	cytosol	54.51	50.4
GSMUA_Achr6P10690_001	Banana	nucleus	54.94	50.2
PGSC0003DMT400083149	Potato	cytosol	56.22	50.19
Os02t0576700-01	Rice	extracellular	54.08	50.0
HORVU6Hr1G051930.1	Barley	nucleus	54.08	49.8
TraesCS6A01G202200.1	Wheat	nucleus	53.65	49.8
TraesCS6B01G227700.1	Wheat	nucleus	53.65	49.8
TraesCS6D01G185800.1	Wheat	golgi	53.65	49.8
Solyc03g116170.2.1	Tomato	cytosol	53.65	49.41
EES07035	Sorghum	cytosol	53.22	49.4
GSMUA_Achr4P00490_001	Banana	cytosol	53.65	48.83
Zm00001d050874_P001	Maize	extracellular	52.36	48.61
Zm00001d016935_P001	Maize	extracellular	52.79	47.67
KRH49525	Soybean	cytosol	32.62	46.34
TraesCS2D01G323500.1	Wheat	cytosol	46.78	43.08
TraesCS2A01G344900.1	Wheat	cytosol	46.35	42.69
TraesCS2B01G342400.1	Wheat	cytosol	46.35	42.69
PGSC0003DMT400050243	Potato	nucleus	51.93	42.61
Os04t0459700-02	Rice	nucleus	46.78	42.08
EES12291	Sorghum	cytosol	46.35	42.02
Bra027399.1-P	Field mustard	nucleus	21.89	18.48
Bra006957.1-P	Field mustard	nucleus	16.31	16.74
Bra013951.1-P	Field mustard	nucleus	21.89	13.93
Bra040674.1-P	Field mustard	nucleus	22.32	13.83
Bra036720.1-P	Field mustard	nucleus	21.89	13.82
Bra031083.1-P	Field mustard	nucleus	22.32	13.72
Bra002778.1-P	Field mustard	nucleus	23.18	13.01

Protein Annotations

EnsemblPlants:Bra025687.1	EnsemblPlants:Bra025687.1-P	EnsemblPlantsGene:Bra025687	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
InterPro:NAP-like_sf	InterPro:NAP_family	ncoils:Coil	PANTHER:PTHR11875	PANTHER:PTHR11875:SF60	PFAM:PF00956
SUPFAM:SSF143113	UniParc:UPI000253F4C5	UniProt:M4EA79	MapMan:12.2.8	:	:

Description

AT1G18800 (E=2e-056) NRP2 | NRP2 (NAP1-RELATED PROTEIN 2); DNA binding / chromatin binding / histone binding

Coordinates

chrA06:-:7286652..7289694

Molecular Weight (calculated)

27171.4 Da

IEP (calculated)

5.025

GRAVY (calculated)

-0.596

Length

233 amino acids

Sequence
(BLAST)

001: MVTDKSKKAK IKKENVEQID GELVISIEKL QEIQDNLEKI NEKASDEVLE VDQKYNVIRK PVYDKRNEVI KAILDLWLTA FLSHPALGEL LSEEDQKIFK
101: YLSSLDVDDA KDVKSGYSIT FLSFFLNHIS LLLCYCCELQ HFNPNPYFED EKLTKTFTFL KEGTTKITVT PIKWKEGKDL PNGVNHEKNR NKHGLPEERF
201: CGTTEEVVVK DRRIEDGEDL SMDWKKLVVE ERW

Best Arabidopsis Sequence Match ( AT1G18800.1 )
(BLAST)

001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE

Arabidopsis Description

NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.