Factsheet for PGSC0003DMT400083149

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400070782

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G18800.1	PGSC0003DMT400070782	AT5G09320.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069890.2.1	Tomato	nucleus	98.85	98.85
KRH16731	Soybean	cytosol, mitochondrion, nucleus	23.37	70.11
CDX83813	Canola	cytosol	67.05	69.17
CDX96698	Canola	cytosol	66.67	68.77
KRH65521	Soybean	cytosol	26.05	68.0
AT1G18800.1	Thale cress	cytosol	66.67	67.97
Bra016541.1-P	Field mustard	cytosol	60.92	67.95
KRH63352	Soybean	nucleus	67.43	67.18
KRH54545	Soybean	nucleus	67.82	67.05
VIT_17s0000g06030.t01	Wine grape	cytosol	65.52	63.81
KRH75776	Soybean	cytosol	22.99	63.16
KRH56918	Soybean	nucleus	61.69	62.89
KRH03467	Soybean	nucleus	62.07	62.79
PGSC0003DMT400017852	Potato	cytosol	60.15	61.57
PGSC0003DMT400050243	Potato	nucleus	66.67	61.27
KRH65520	Soybean	nucleus	25.67	60.91
AT1G74560.3	Thale cress	cytosol	60.54	59.85
CDY26724	Canola	cytosol	57.47	59.29
CDY19242	Canola	cytosol	56.32	56.76
Bra025687.1-P	Field mustard	cytosol	50.19	56.22
PGSC0003DMT400056432	Potato	cytosol	41.76	52.15
KRH49525	Soybean	cytosol	27.59	43.9
PGSC0003DMT400037682	Potato	nucleus	39.08	35.92
PGSC0003DMT400006378	Potato	nucleus	22.22	23.11
PGSC0003DMT400055114	Potato	nucleus	32.18	22.46
PGSC0003DMT400000751	Potato	nucleus	31.42	22.16
PGSC0003DMT400012517	Potato	nucleus	28.35	21.2
PGSC0003DMT400021185	Potato	nucleus	25.29	20.18

Protein Annotations

EntrezGene:102586972	MapMan:12.2.8	Gene3D:3.30.1120.90	ncoils:Coil	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043
UniProt:M1D6K9	InterPro:NAP-like_sf	InterPro:NAP_family	PFAM:PF00956	EnsemblPlantsGene:PGSC0003DMG400033079	PGSC:PGSC0003DMG400033079
EnsemblPlants:PGSC0003DMT400083149	PANTHER:PTHR11875	PANTHER:PTHR11875:SF60	SUPFAM:SSF143113	UniParc:UPI000294F31C	RefSeq:XP_006354785.1
SEG:seg	:	:	:	:	:

Description

SET protein, phospatase 2A inhibitor [Source:PGSC_GENE;Acc:PGSC0003DMG400033079]

Coordinates

chr6:+:51719720..51725016

Molecular Weight (calculated)

30347.4 Da

IEP (calculated)

3.953

GRAVY (calculated)

-1.066

Length

261 amino acids

Sequence
(BLAST)

001: MVVDKGKKQK VEEENYIDEK LIFSIEKLQE IQDDLDKINE KASEEVLEIE QKYNKIRKPV YDKRNDIINS ISDFWLTAFL SHPVLGDLLT EEDQKIFKFL
101: SSIEVEDSKD VKFGYSITFN FKSNPFFENS KLSKTYTFLE DGPTKITATP IKWKEGKGIP NGVAQEKKGN KRSHAEESFF TWFSEVNKKD DSDDDENEVL
201: EIQDEVAEII KDDLWPNPLT YFTNEPDEED FEGDEGGDEG EDSEDEGDEE EEEDDEDEED K

Best Arabidopsis Sequence Match ( AT1G18800.1 )
(BLAST)

001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE

Arabidopsis Description

NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.