Factsheet for PGSC0003DMT400017852

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g067370.2.1	Tomato	nucleus	94.12	94.49
VIT_14s0108g00510.t01	Wine grape	cytosol	69.41	71.95
GSMUA_Achr10P...	Banana	nucleus	69.02	68.48
GSMUA_Achr6P10690_001	Banana	nucleus	66.27	66.27
GSMUA_Achr4P00490_001	Banana	cytosol	65.88	65.62
GSMUA_Achr7P21000_001	Banana	cytosol	61.96	62.7
EES07035	Sorghum	cytosol	60.78	61.75
TraesCS6B01G227700.1	Wheat	nucleus	60.0	60.96
TraesCS6A01G202200.1	Wheat	nucleus	59.61	60.56
Zm00001d050874_P001	Maize	extracellular	59.61	60.56
TraesCS6D01G185800.1	Wheat	golgi	59.61	60.56
HORVU6Hr1G051930.1	Barley	nucleus	60.0	60.47
Zm00001d016935_P001	Maize	extracellular	61.18	60.47
PGSC0003DMT400083149	Potato	cytosol	61.57	60.15
Os02t0576700-01	Rice	extracellular	59.22	59.92
TraesCS2B01G342400.1	Wheat	cytosol	53.33	53.75
TraesCS2D01G323500.1	Wheat	cytosol	52.94	53.36
TraesCS2A01G344900.1	Wheat	cytosol	52.94	53.36
Os04t0459700-02	Rice	nucleus	53.73	52.9
EES12291	Sorghum	cytosol	50.98	50.58
PGSC0003DMT400056432	Potato	cytosol	39.61	48.33
PGSC0003DMT400050243	Potato	nucleus	51.76	46.48
PGSC0003DMT400037682	Potato	nucleus	36.86	33.1
PGSC0003DMT400055114	Potato	nucleus	31.76	21.66
PGSC0003DMT400000751	Potato	nucleus	30.59	21.08
PGSC0003DMT400006378	Potato	nucleus	20.0	20.32
PGSC0003DMT400021185	Potato	nucleus	25.88	20.18
PGSC0003DMT400012517	Potato	nucleus	25.1	18.34

Protein Annotations

EnsemblPlants:PGSC0003DMT400017852	EnsemblPlantsGene:PGSC0003DMG400006933	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf
InterPro:NAP_family	ncoils:Coil	PANTHER:PTHR11875	PANTHER:PTHR11875:SF60	PFAM:PF00956	PGSC:PGSC0003DMG400006933
SEG:seg	SUPFAM:SSF143113	UniParc:UPI000294D6F4	UniProt:M1A9L1	MapMan:12.2.8	:

Description

SET protein, phospatase 2A inhibitor [Source:PGSC_GENE;Acc:PGSC0003DMG400006933]

Coordinates

chr2:-:25893333..25900884

Molecular Weight (calculated)

29080.8 Da

IEP (calculated)

3.808

GRAVY (calculated)

-0.921

Length

255 amino acids

Sequence
(BLAST)

001: MVIDNSKKLK TAVEENAQQI DTGGVSSIEK LQEVQDELEK VNEQASEEVL EIEQKYNEIR RPVYEKRNEL IKSIPDFWVT AFLSHPALGE LLNVEDQKIF
101: KYLDSLDVED FKDVTSGYSL TFIFKPNPYF EDTKLVKTYT FLDEGSTKIT GTAIKWKEGM GAAYGGNPEM KGNKRPASED SFFSWFSETQ LKDIADGLSD
201: EVGEIIKEDL WPNPLKYFNN EADEEDSDGD EDTDEDDEDE EDNDDDDDEA DEDDG

Best Arabidopsis Sequence Match ( AT1G18800.1 )
(BLAST)

001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE

Arabidopsis Description

NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.