Factsheet for PGSC0003DMT400056432

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g021350.2.1	Tomato	cytosol	84.69	55.66
PGSC0003DMT400037682	Potato	nucleus	66.99	49.3
PGSC0003DMT400083149	Potato	cytosol	52.15	41.76
PGSC0003DMT400017852	Potato	cytosol	48.33	39.61
PGSC0003DMT400050243	Potato	nucleus	50.72	37.32
PGSC0003DMT400000751	Potato	nucleus	31.58	17.84
PGSC0003DMT400055114	Potato	nucleus	31.58	17.65
PGSC0003DMT400006378	Potato	nucleus	20.57	17.13
PGSC0003DMT400012517	Potato	nucleus	28.23	16.91
PGSC0003DMT400021185	Potato	nucleus	25.36	16.21

Protein Annotations

EnsemblPlants:PGSC0003DMT400056432	EnsemblPlantsGene:PGSC0003DMG400021925	Gene3D:3.30.1120.90	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0006334	GO:GO:0008150	GO:GO:0009987	GO:GO:0016043	InterPro:NAP-like_sf
InterPro:NAP_family	ncoils:Coil	PANTHER:PTHR11875	PANTHER:PTHR11875:SF60	PFAM:PF00956	PGSC:PGSC0003DMG400021925
SEG:seg	SUPFAM:SSF143113	UniParc:UPI000295B4D0	UniProt:M1BZF3	MapMan:12.2.8	:

Description

SET protein, phospatase 2A inhibitor [Source:PGSC_GENE;Acc:PGSC0003DMG400021925]

Coordinates

chr2:+:11245313..11246516

Molecular Weight (calculated)

24462.6 Da

IEP (calculated)

4.449

GRAVY (calculated)

-0.678

Length

209 amino acids

Sequence
(BLAST)

001: MEKLVEDDEN NNVIDHDGNQ LVLCVEKLQE LQEELEKINK EGSGELLKVA QKYNRNRQPF YDKRTNIIKD IPGFWSTAFL RHHVLGGLVC TEEDCKIFEF
101: LSSIKVEVSQ DVKSGYIIIF NFDSNEYFEN TKLWKKYGCT KISASSIQWA QGKGVDERSF FKWFSEVDKM DEIGKIIKDE LWSDPLFCFH HEADEDKVVK
201: DSEDEEQND

Best Arabidopsis Sequence Match ( AT1G18800.1 )
(BLAST)

001: MVTDKSKKAK TEEENVEQID AELVLSIEKL QEIQDDLEKI NEKASDEVLE VEQKYNVIRK PVYDKRNEII KTIPDFWLTA FLSHPALGEL LTEEDQKIFK
101: YLSSLDVEDA KDVKSGYSIT FSFNPNPFFE DGKLTKTFTF LEEGTTKITA TPIKWKEGKG LANGVNHEKN GNKRALPEES FFTWFSDAQH KEDVEDEMQD
201: EQVADIIKED LWPNPLTYFN NDADEEDFDG DDDGDEEEKE GDSDEDDDEE DEVGEE

Arabidopsis Description

NRP2NRP2 [Source:UniProtKB/TrEMBL;Acc:A0A178W8U0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.