Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400056432 | Potato | cytosol | 55.66 | 84.69 |
| Solyc12g077660.1.1 | Tomato | cytosol | 11.32 | 57.14 |
| PGSC0003DMT400037682 | Potato | nucleus | 48.74 | 54.58 |
| Solyc03g116170.2.1 | Tomato | cytosol | 37.42 | 47.04 |
| Solyc06g069890.2.1 | Tomato | nucleus | 35.85 | 43.68 |
| Solyc02g067370.2.1 | Tomato | nucleus | 33.33 | 41.73 |
| Solyc12g077670.1.1 | Tomato | cytosol | 11.64 | 40.22 |
| Solyc05g018810.2.1 | Tomato | nucleus | 21.38 | 18.09 |
| Solyc12g008940.1.1 | Tomato | nucleus | 21.07 | 17.91 |
| Solyc06g062690.2.1 | Tomato | nucleus | 19.5 | 17.77 |
| Solyc08g063000.2.1 | Tomato | nucleus | 18.24 | 16.48 |
| Solyc03g121700.2.1 | Tomato | nucleus | 18.87 | 16.13 |
Protein Annotations
| EnsemblPlants:Solyc02g021350.2.1 | EnsemblPlantsGene:Solyc02g021350.2 | Gene3D:3.30.1120.90 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006334 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016043 | InterPro:NAP-like_sf |
| InterPro:NAP_family | ncoils:Coil | PANTHER:PTHR11875 | PANTHER:PTHR11875:SF60 | PFAM:PF00956 | SEG:seg |
| SUPFAM:SSF143113 | UniParc:UPI0002768816 | UniProt:K4B4Y5 | MapMan:12.2.8 | : | : |
Description
No Description!
Coordinates
chr2:+:22505067..22506476
Molecular Weight (calculated)
37792.2 Da
IEP (calculated)
5.051
GRAVY (calculated)
-0.619
Length
318 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDINLVLK TMVWILGNHR NTTILQFKLL LKSLQIQKLF MTLVLRVLNK EYASEQETLN KIWDLKAEHM KLITDARADL NKMWNDKRKP KRKRRRKMEK
101: LVEDDENNNI IDHDGNQLVL CVEKLQELQE ELEKINKEAS RELLKVVQKY NPIRQPFYEK RADIIKDIPG FWSRAFLKHH LLGGLVCTEE DLKIFEFLRS
201: IEVEVSQDVK SGYTIIFNFD SNEYFENTKL WKKYGRTKTT ASPIQWAQGK IVDEQSFFKW FSEVDNIDEI GEIIKDDLWS DPLFSFRYEA DEENVDNVAV
301: KKYEDMVVKD SEDVEEND
101: LVEDDENNNI IDHDGNQLVL CVEKLQELQE ELEKINKEAS RELLKVVQKY NPIRQPFYEK RADIIKDIPG FWSRAFLKHH LLGGLVCTEE DLKIFEFLRS
201: IEVEVSQDVK SGYTIIFNFD SNEYFENTKL WKKYGRTKTT ASPIQWAQGK IVDEQSFFKW FSEVDNIDEI GEIIKDDLWS DPLFSFRYEA DEENVDNVAV
301: KKYEDMVVKD SEDVEEND
001: MVADKSKKSK IEEKGEEENL EQIDAELVLS IEKLQEIQDD LEKINEKASD EVLEVEQKYN VIRKPVYDKR NEVIQSIPGF WMTAFLSHPA LGDLLTEEDQ
101: KIFKYLNSLE VEDAKDVKSG YSITFHFTSN PFFEDAKLTK TFTFLEEGTT KITATPIKWK EGKGLPNGVN HDDKKGNKRA LPEESFFTWF TDAQHKEDAG
201: DEIHDEVADI IKEDLWSNPL TYFNNDADEE DFDGDDDGDE EGEEDDDDEE EEDGEE
101: KIFKYLNSLE VEDAKDVKSG YSITFHFTSN PFFEDAKLTK TFTFLEEGTT KITATPIKWK EGKGLPNGVN HDDKKGNKRA LPEESFFTWF TDAQHKEDAG
201: DEIHDEVADI IKEDLWSNPL TYFNNDADEE DFDGDDDGDE EGEEDDDDEE EEDGEE
Arabidopsis Description
NRP1NAP1-related protein 1 [Source:TAIR;Acc:AT1G74560]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.