Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G077430.1 | Barley | cytosol | 75.96 | 40.93 |
| GSMUA_Achr9P15090_001 | Banana | cytosol | 37.5 | 40.21 |
| KRH16828 | Soybean | cytosol | 50.96 | 38.41 |
| AT2G33735.1 | Thale cress | cytosol | 42.31 | 36.97 |
| CDY71923 | Canola | cytosol | 37.5 | 36.79 |
| PGSC0003DMT400033584 | Potato | cytosol | 47.12 | 35.0 |
| VIT_18s0001g07260.t01 | Wine grape | cytosol | 46.15 | 34.78 |
| Bra005476.1-P | Field mustard | cytosol | 40.38 | 34.43 |
| CDY17195 | Canola | cytosol | 40.38 | 34.43 |
| Solyc04g076080.2.1 | Tomato | cytosol | 46.15 | 34.29 |
| CDY27949 | Canola | cytosol | 39.42 | 33.61 |
| HORVU6Hr1G067130.1 | Barley | cytosol | 35.58 | 30.58 |
| KRH72437 | Soybean | mitochondrion | 45.19 | 30.32 |
| HORVU7Hr1G039640.19 | Barley | cytosol | 25.96 | 6.12 |
| HORVU6Hr1G076490.9 | Barley | nucleus | 24.04 | 5.67 |
| HORVU3Hr1G042500.2 | Barley | plastid | 23.08 | 5.14 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G049750.1 | EnsemblPlantsGene:HORVU2Hr1G049750 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45504 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | SEG:seg |
| SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000B467922 | UniProt:A0A287HYW3 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr2H:+:284369395..284370397
Molecular Weight (calculated)
12289.5 Da
IEP (calculated)
5.161
GRAVY (calculated)
-0.577
Length
104 amino acids
Sequence
(BLAST)
(BLAST)
001: MLWEWEDGDK AVRTGDEVPV DFNFFSFFAM PKDYYKIPEV DYDALEETIR SSYIHLALKW HPDKKQGEEK ATYRFQDINH AYQVLTLSRC PRRPPSPVSL
101: LLSC
101: LLSC
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.