Factsheet for HORVU3Hr1G042500.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G202200.1	Wheat	cytosol	85.01	97.3
TraesCS3D01G201400.2	Wheat	cytosol	84.8	97.06
Os01t0512100-01	Rice	plasma membrane	79.87	92.56
EES16141	Sorghum	nucleus	79.66	91.18
Zm00001d041627_P002	Maize	mitochondrion, plasma membrane	77.94	89.43
GSMUA_Achr8P31640_001	Banana	cytosol	70.66	80.88
KRH35922	Soybean	nucleus	68.95	78.54
KRG90857	Soybean	nucleus	68.52	78.05
VIT_01s0011g03790.t01	Wine grape	nucleus	68.95	77.59
Solyc04g007370.2.1	Tomato	cytosol	68.74	77.54
CDX96027	Canola	nucleus	67.67	77.07
CDY44905	Canola	nucleus	67.67	77.07
CDY59029	Canola	nucleus	67.67	77.07
Bra033942.1-P	Field mustard	nucleus	67.45	76.83
Bra004301.1-P	Field mustard	nucleus	66.17	76.67
PGSC0003DMT400037773	Potato	cytosol	67.67	76.51
AT1G68370.1	Thale cress	nucleus	66.81	76.1
PGSC0003DMT400015325	Potato	cytosol	59.53	75.96
Solyc05g009160.2.1	Tomato	nucleus	67.02	75.79
CDX81506	Canola	nucleus	67.24	74.76
HORVU6Hr1G076490.9	Barley	nucleus	49.04	51.93
HORVU7Hr1G039640.19	Barley	cytosol	46.47	49.21
HORVU6Hr1G067130.1	Barley	cytosol	9.42	36.36
HORVU2Hr1G049750.1	Barley	cytosol	5.14	23.08
HORVU6Hr1G077430.1	Barley	cytosol	8.14	19.69
Os03t0262500-01	Rice	plasma membrane, plastid	6.21	15.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	UniProt:A0A287KW16	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958	EnsemblPlantsGene:HORVU3Hr1G042500
EnsemblPlants:HORVU3Hr1G042500.2	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PFAM:PF00226	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44272	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000B4830A5
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:269929074..269963305

Molecular Weight (calculated)

52140.5 Da

IEP (calculated)

9.227

GRAVY (calculated)

-0.616

Length

467 amino acids

Sequence
(BLAST)

001: RPAPRANRAE TFPSSGKSRG ICMRRGIVSR FLPRPAASSE RPQTRRESSP AARAGYCSLM ASSGKMEGPS APALRRDPYE VLSVSRDSSD QEIKSAYRKL
101: ALKYHPDKNA SNPEASELFK EVAYSYSILS DPEKRRQYDT AGFEALENEG MDMEIDLSNL GTVNTMFAAL FSKLGVPIKT TVSPTVLEEA MNGTVTVRPL
201: PVGTSAMGKV EKQSAHFFGV TISEEQTHSG IVVRVTSVAQ SKFKLLFFEQ EVNGGYGLAL QAYSQKTGKV TSAGMYFLHF QVYRMDSTVN ALAMAKDPEA
301: AFFKRLEGLQ PCEVSTLKPG THIFAVYGDN FFKPASYTIE AMCAKSYEDT TERLKEIEAK ILEKRNDLRQ FETEYRKALA RFQEATTRYT QEKEAVDDML
401: RERDDIHSSF TTERTITSSL GAGSSSSRYP VEQNKTESPE NGNIDGREKS TKKKWFNLNL NRSDRRA

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.