Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 4
- golgi 3
- nucleus 2
- cytosol 1
- plastid 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0693200-01 | Rice | cytosol | 6.42 | 9.92 |
| Os02t0760000-00 | Rice | cytosol | 9.63 | 7.59 |
| Zm00001d041627_P002 | Maize | mitochondrion, plasma membrane | 16.04 | 7.37 |
| GSMUA_Achr8P31640_001 | Banana | cytosol | 16.04 | 7.35 |
| Bra033942.1-P | Field mustard | nucleus | 16.04 | 7.32 |
| CDY44905 | Canola | nucleus | 16.04 | 7.32 |
| Os01t0512100-01 | Rice | plasma membrane | 15.51 | 7.2 |
| Bra004301.1-P | Field mustard | nucleus | 15.51 | 7.2 |
| CDX81506 | Canola | nucleus | 16.04 | 7.14 |
| EES16141 | Sorghum | nucleus | 15.51 | 7.11 |
| TraesCS3D01G201400.2 | Wheat | cytosol | 15.51 | 7.11 |
| TraesCS3A01G202200.1 | Wheat | cytosol | 15.51 | 7.11 |
| CDY59029 | Canola | nucleus | 15.51 | 7.07 |
| CDX96027 | Canola | nucleus | 15.51 | 7.07 |
| AT1G68370.1 | Thale cress | nucleus | 14.44 | 6.59 |
| KRH35922 | Soybean | nucleus | 14.44 | 6.59 |
| PGSC0003DMT400037773 | Potato | cytosol | 14.44 | 6.54 |
| Solyc05g009160.2.1 | Tomato | nucleus | 14.44 | 6.54 |
| Solyc04g007370.2.1 | Tomato | cytosol | 14.44 | 6.52 |
| VIT_01s0011g03790.t01 | Wine grape | nucleus | 14.44 | 6.51 |
| KRG90857 | Soybean | nucleus | 13.9 | 6.34 |
| HORVU3Hr1G042500.2 | Barley | plastid | 15.51 | 6.21 |
| Os02t0741100-01 | Rice | nucleus | 12.83 | 5.43 |
| PGSC0003DMT400015325 | Potato | cytosol | 9.09 | 4.64 |
| Os06t0237800-01 | Rice | cytosol, nucleus | 0.0 | 0.0 |
Protein Annotations
| MapMan:35.2 | EntrezGene:4332328 | ProteinID:ABF95098.1 | ProteinID:ABF95099.1 | EMBL:AK071153 | EMBL:AK120384 |
| ProteinID:BAS83371.1 | EnsemblPlantsGene:Os03g0262500 | EnsemblPlants:Os03t0262500-01 | UniProt:Q10NQ8 | SignalP:SignalP-noTM | UniParc:UPI0000DB4938 |
| RefSeq:XP_015631851.1 | RefSeq:XP_015631852.1 | RefSeq:XP_015631854.1 | RefSeq:XP_015631855.1 | RefSeq:XP_015631856.1 | RefSeq:XP_015631857.1 |
| RefSeq:XP_015631858.1 | RefSeq:XP_015631859.1 | RefSeq:XP_015631860.1 | RefSeq:XP_015631861.1 | RefSeq:XP_015631862.1 | RefSeq:XP_015631863.1 |
| RefSeq:XP_015631865.1 | RefSeq:XP_015631866.1 | RefSeq:XP_015631867.1 | RefSeq:XP_015631868.1 | RefSeq:XP_015631869.1 | RefSeq:XP_015631870.1 |
| RefSeq:XP_015631871.1 | RefSeq:XP_015631872.1 | RefSeq:XP_015631873.1 | RefSeq:XP_015631874.1 | SEG:seg | : |
Description
Hypothetical conserved gene. (Os03t0262500-01);Molecular chaperone, heat shock protein, Hsp40, DnaJ domain containing protein. (Os03t0262500-02)
Coordinates
chr3:-:8607999..8609105
Molecular Weight (calculated)
20355.9 Da
IEP (calculated)
12.210
GRAVY (calculated)
-0.111
Length
187 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSLPFFLPL LSLLPHLVAA PPRAGRARRP SEPAQVLPSS FSLHLCRRRR LRRGRTDAAP VVAVVAVSPP FFSLPFCQRR QPSPFVSLLS VSQRRRPPAT
101: AVLCQHLLRP PPLCPSAPLF PPTQIYGAAP WSAAQFLAGS DSLTGGERRS GRPARMEEAD WQKLAVEISI KPVPFKHPGP TSSAHGL
101: AVLCQHLLRP PPLCPSAPLF PPTQIYGAAP WSAAQFLAGS DSLTGGERRS GRPARMEEAD WQKLAVEISI KPVPFKHPGP TSSAHGL
001: MLPSLSLSTA NRHLSVTDTI PLPNSNSNAT PPLRIAIIGF GNYGQFLAET LISQGHILFA HSRSDHSSAA RRLGVSYFTD LHDLCERHPD VVLLCTSILS
101: IENILKTLPF QRLRRNTLFV DVLSVKEFAK TLLLQYLPED FDILCTHPMF GPQSVSSNHG WRGLRFVYDK VRIGEERLRV SRCESFLEIF VREGCEMVEM
201: SVTDHDKFAA ESQFITHTLG RLLGMLKLIS TPINTKGYEA LLDLAENICG DSFDLYYGLF VYNNNSLEVL ERIDLAFEAL RKELFSRLHG VVRKQSFEGE
301: AKKVHVFPNC GENDASLDMM RSEDVVVKYE YNSQVSGSVN DGSRLKIGIV GFGNFGQFLG KTMVKQGHTV LAYSRSDYTD EAAKLGVSYF SDLDDLFEEH
401: PEVIILCTSI LSTEKVLESL PFQRLKRSTL FVDVLSVKEF PRNLFLQTLP QDFDILCTHP MFGPESGKNG WNNLAFVFDK VRIGMDDRRK SRCNSFLDIF
501: AREGCRMVEM SCAEHDWHAA GSQFITHTVG RLLEKLSLES TPIDTKGYET LLKLVENTAG DSFDLYYGLF LYNPNAMEQL ERFHVAFESL KTQLFGRLHS
601: QHSHELAKSS SPKTTKLLTS
101: IENILKTLPF QRLRRNTLFV DVLSVKEFAK TLLLQYLPED FDILCTHPMF GPQSVSSNHG WRGLRFVYDK VRIGEERLRV SRCESFLEIF VREGCEMVEM
201: SVTDHDKFAA ESQFITHTLG RLLGMLKLIS TPINTKGYEA LLDLAENICG DSFDLYYGLF VYNNNSLEVL ERIDLAFEAL RKELFSRLHG VVRKQSFEGE
301: AKKVHVFPNC GENDASLDMM RSEDVVVKYE YNSQVSGSVN DGSRLKIGIV GFGNFGQFLG KTMVKQGHTV LAYSRSDYTD EAAKLGVSYF SDLDDLFEEH
401: PEVIILCTSI LSTEKVLESL PFQRLKRSTL FVDVLSVKEF PRNLFLQTLP QDFDILCTHP MFGPESGKNG WNNLAFVFDK VRIGMDDRRK SRCNSFLDIF
501: AREGCRMVEM SCAEHDWHAA GSQFITHTVG RLLEKLSLES TPIDTKGYET LLKLVENTAG DSFDLYYGLF LYNPNAMEQL ERFHVAFESL KTQLFGRLHS
601: QHSHELAKSS SPKTTKLLTS
Arabidopsis Description
arogenate dehydrogenase [Source:TAIR;Acc:AT5G34930]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.