Factsheet for Bra033942.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
endoplasmic reticulum 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY44905	Canola	nucleus	99.02	99.02
Bra004301.1-P	Field mustard	nucleus	91.46	93.05
KRH35922	Soybean	nucleus	83.66	83.66
KRG90857	Soybean	nucleus	83.17	83.17
VIT_01s0011g03790.t01	Wine grape	nucleus	83.66	82.65
PGSC0003DMT400037773	Potato	cytosol	82.68	82.08
Solyc05g009160.2.1	Tomato	nucleus	82.2	81.6
Solyc04g007370.2.1	Tomato	cytosol	81.95	81.16
PGSC0003DMT400015325	Potato	cytosol	72.2	80.87
TraesCS3D01G201400.2	Wheat	cytosol	77.56	77.94
TraesCS3A01G202200.1	Wheat	cytosol	77.56	77.94
GSMUA_Achr8P31640_001	Banana	cytosol	77.56	77.94
Os01t0512100-01	Rice	plasma membrane	76.59	77.92
Zm00001d041627_P002	Maize	mitochondrion, plasma membrane	76.59	77.15
EES16141	Sorghum	nucleus	76.59	76.96
HORVU3Hr1G042500.2	Barley	plastid	76.83	67.45
Bra024636.1-P	Field mustard	nucleus	57.07	54.17
Bra027824.1-P	Field mustard	nucleus	49.02	48.55
Bra008607.1-P	Field mustard	cytosol	9.76	35.71
Bra016320.1-P	Field mustard	plastid	31.22	33.42
Bra005476.1-P	Field mustard	cytosol	9.27	31.15
Bra021405.1-P	Field mustard	cytosol	10.98	30.61
Bra006363.1-P	Field mustard	cytosol	10.24	29.17
Os03t0262500-01	Rice	plasma membrane, plastid	7.32	16.04

Protein Annotations

EnsemblPlants:Bra033942.1	EnsemblPlants:Bra033942.1-P	EnsemblPlantsGene:Bra033942	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44272	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI00025462C1	UniProt:M4EYQ0	MapMan:26.3.1.3	:	:	:

Description

AT1G68370 (E=3e-201) ARG1 | ARG1 (ALTERED RESPONSE TO GRAVITY 1); cytoskeletal protein binding

Coordinates

chrA02:-:10753048..10754800

Molecular Weight (calculated)

45295.9 Da

IEP (calculated)

6.114

GRAVY (calculated)

-0.610

Length

410 amino acids

Sequence
(BLAST)

001: MSSKKAEGSS SPATRRDPYE VLSVSRTASD QEIKSSYRKL ALKYHPDKNA NNPDASELFK EVAYSYSILS DPDKRRQYDN AGFEAIDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT SVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEESEKTGKV TSAGMYFLHF QVYRMDSTIN ALAVAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTME ALCAKTYEDT TENLKEIEAQ
301: ILRKRNDLRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDSIHSSF SVVKTPSGSN LSNGSSSKAQ GDESKGDGDS VGEEGGSESR DKSKRKWFNL
401: NLKGSDKKVG

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.