Factsheet for GSMUA_Achr8P31640_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
endoplasmic reticulum 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0512100-01	Rice	plasma membrane	82.84	83.87
EES16141	Sorghum	nucleus	83.09	83.09
Zm00001d041627_P002	Maize	mitochondrion, plasma membrane	82.35	82.56
KRH35922	Soybean	nucleus	81.86	81.46
TraesCS3D01G201400.2	Wheat	cytosol	81.37	81.37
GSMUA_Achr4P13770_001	Banana	cytosol	80.88	81.28
VIT_01s0011g03790.t01	Wine grape	nucleus	82.6	81.2
TraesCS3A01G202200.1	Wheat	cytosol	81.13	81.13
KRG90857	Soybean	nucleus	81.37	80.98
CDY44905	Canola	nucleus	78.43	78.05
Bra033942.1-P	Field mustard	nucleus	77.94	77.56
CDX96027	Canola	nucleus	77.45	77.07
CDY59029	Canola	nucleus	77.45	77.07
Bra004301.1-P	Field mustard	nucleus	75.98	76.92
AT1G68370.1	Thale cress	nucleus	77.21	76.83
CDX81506	Canola	nucleus	77.7	75.48
HORVU3Hr1G042500.2	Barley	plastid	80.88	70.66
GSMUA_Achr4P06780_001	Banana	cytosol	9.07	68.52
GSMUA_Achr3P06010_001	Banana	cytosol	59.31	57.62
GSMUA_Achr9P21410_001	Banana	nucleus	71.57	48.03
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	58.09	46.29
GSMUA_Achr2P12110_001	Banana	cytosol	10.78	36.67
GSMUA_Achr10P...	Banana	cytosol	10.78	33.33
GSMUA_Achr9P15090_001	Banana	cytosol	4.66	19.59
GSMUA_Achr7P10040_001	Banana	cytosol	2.94	18.46
Os03t0262500-01	Rice	plasma membrane, plastid	7.35	16.04

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0008150
GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958	EnsemblPlantsGene:GSMUA_Achr8G31640_001	EnsemblPlants:GSMUA_Achr8P31640_001
EnsemblPlants:GSMUA_Achr8T31640_001	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M0TVB6	PFAM:PF00226
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44272	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000295394F	:	:	:	:	:

Description

Chaperone protein dnaJ 15 [Source:GMGC_GENE;Acc:GSMUA_Achr8G31640_001]

Coordinates

chr8:+:33225581..33234292

Molecular Weight (calculated)

45567.6 Da

IEP (calculated)

6.804

GRAVY (calculated)

-0.588

Length

408 amino acids

Sequence
(BLAST)

001: MSSGKMEGPS APAVRRDPYE VLSVTRESSD QEIKSAYRKL ALKYHPDKNT SNPEASELFK EVAYSYSILS DPEKRRQYDT AGFEALENEN MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TIAANVLEEA LNGTVTVRPL PLGTSSNGKV EKQCAHFFSI TINDHQAQAG VVIRVISASQ SKFKLLYFEQ EPNGGYGLAL
201: QEDSEKTGKA TSAGMYFLHF QVYRMDSTVN ALAMAKDPEA AFFKRLEGLQ PCEVSELKPG THIFAVYGDN FFKPATYTIE AMCAKSYEDT TGRLKEVEAK
301: ILAKRNDLRQ FEIEYRKALA RFQEVTNKYN QEKQSVDELL KQRDTIHSSF TTVRTMINSS GVTGSSSKIP NDDSRLDSPA EDGSFDGKDK SNKKKWFNLN
401: LNRSDKKG

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.