Factsheet for GSMUA_Achr4P13770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
endoplasmic reticulum 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P31640_001	Banana	cytosol	81.28	80.88
VIT_01s0011g03790.t01	Wine grape	nucleus	78.33	76.63
Solyc04g007370.2.1	Tomato	cytosol	77.83	76.33
KRH35922	Soybean	nucleus	76.85	76.1
PGSC0003DMT400015325	Potato	cytosol	68.47	75.96
KRG90857	Soybean	nucleus	76.6	75.85
PGSC0003DMT400037773	Potato	cytosol	76.6	75.3
Solyc05g009160.2.1	Tomato	nucleus	76.11	74.82
GSMUA_Achr4P06780_001	Banana	cytosol	8.62	64.81
GSMUA_Achr3P06010_001	Banana	cytosol	56.65	54.76
GSMUA_Achr9P21410_001	Banana	nucleus	72.66	48.52
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	56.16	44.53
GSMUA_Achr2P12110_001	Banana	cytosol	10.59	35.83
GSMUA_Achr10P...	Banana	cytosol	10.1	31.06
GSMUA_Achr9P15090_001	Banana	cytosol	4.93	20.62
GSMUA_Achr7P10040_001	Banana	cytosol	2.96	18.46

Protein Annotations

EnsemblPlants:GSMUA_Achr4P13770_001	EnsemblPlants:GSMUA_Achr4T13770_001	EnsemblPlantsGene:GSMUA_Achr4G13770_001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44272	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000295EFF8	UniProt:M0SNP2	MapMan:26.3.1.3	:	:	:

Description

Chaperone protein dnaJ 15 [Source:GMGC_GENE;Acc:GSMUA_Achr4G13770_001]

Coordinates

chr4:-:10305237..10312119

Molecular Weight (calculated)

45189.4 Da

IEP (calculated)

6.284

GRAVY (calculated)

-0.426

Length

406 amino acids

Sequence
(BLAST)

001: MASGRIGGPS APPVRRDPYE VLCVSKDSSD QDIKAAYRKL ALKYHPDKNA SNPEASELFK EVAYSYSILS DPEKRRQYDA AGFEAFESEG IDMEIDLSSL
101: GTVNTMFAAL FSKLGVPIKT TISATVLEEA LSGTVTVKPL PLGTSVTEKV DKQSAHFFGV TINDQQAQAG IVVRVTSAIQ SKFKLLYFEQ EANGGYDLAL
201: QEDSEKIGKV TSAAMYFLHF QVYRMDSVVN TLAMARDPEA AFFKRLEGLQ PCEASELKPG THIFAVYGDN FFKSATYTIE ALCAKSYEDT TEKLKEIESK
301: ILAKRDALRQ FEIEYRKALA CFQEVTNKYT QEKQSVDELL KQRDNILSSF TIHRSVINSS GDANSSCKTP DEDIRFGSPN GSLDVKNKLN KKKWFNLNLN
401: HSDRKG

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.