Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 3
- nucleus 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr9P15090_001 | Banana | cytosol | 60.0 | 40.21 |
| GSMUA_Achr10P... | Banana | cytosol | 75.38 | 37.12 |
| EES07561 | Sorghum | cytosol | 61.54 | 30.77 |
| TraesCS6D01G293800.1 | Wheat | cytosol | 60.0 | 29.77 |
| TraesCS6A01G314500.1 | Wheat | cytosol | 60.0 | 29.77 |
| TraesCS6B01G344500.1 | Wheat | cytosol | 58.46 | 29.23 |
| Solyc04g076080.2.1 | Tomato | cytosol | 60.0 | 27.86 |
| PGSC0003DMT400033584 | Potato | cytosol | 60.0 | 27.86 |
| KRH16828 | Soybean | cytosol | 58.46 | 27.54 |
| VIT_18s0001g07260.t01 | Wine grape | cytosol | 56.92 | 26.81 |
| Zm00001d018131_P004 | Maize | cytosol | 58.46 | 26.39 |
| CDY71923 | Canola | cytosol | 32.31 | 19.81 |
| HORVU6Hr1G077430.1 | Barley | cytosol | 58.46 | 19.69 |
| CDY17195 | Canola | cytosol | 36.92 | 19.67 |
| Bra005476.1-P | Field mustard | cytosol | 36.92 | 19.67 |
| KRH72437 | Soybean | mitochondrion | 46.15 | 19.35 |
| AT2G33735.1 | Thale cress | cytosol | 35.38 | 19.33 |
| GSMUA_Achr2P12110_001 | Banana | cytosol | 35.38 | 19.17 |
| CDY27949 | Canola | cytosol | 35.38 | 18.85 |
| Os02t0760000-00 | Rice | cytosol | 63.08 | 17.3 |
| GSMUA_Achr3P06010_001 | Banana | cytosol | 23.08 | 3.57 |
| GSMUA_Achr4P13770_001 | Banana | cytosol | 18.46 | 2.96 |
| GSMUA_Achr8P31640_001 | Banana | cytosol | 18.46 | 2.94 |
| GSMUA_Achr9P14460_001 | Banana | cytosol, nucleus, plastid | 23.08 | 2.93 |
| GSMUA_Achr9P21410_001 | Banana | nucleus | 18.46 | 1.97 |
| GSMUA_Achr4P06780_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr7P10040_001 | EnsemblPlants:GSMUA_Achr7T10040_001 | EnsemblPlantsGene:GSMUA_Achr7G10040_001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45504 | SEG:seg | SUPFAM:SSF46565 | UniParc:UPI000294CC22 |
| UniProt:M0TG92 | MapMan:35.2 | : | : | : | : |
Description
Chaperone protein dnaJ [Source:GMGC_GENE;Acc:GSMUA_Achr7G10040_001]
Coordinates
chr7:+:8127859..8130249
Molecular Weight (calculated)
8044.2 Da
IEP (calculated)
3.805
GRAVY (calculated)
-0.720
Length
65 amino acids
Sequence
(BLAST)
(BLAST)
1: MWWDEEFREE EEVEEEEQRE SPVDFDFFSL LSKPKDYYKI LEVDYDATEE IIRSNYIRLA LVCNI
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKVGFLF LFSLLGISNL LCNFFKTHLR PKLLDPFLYS LSSQDTV
101: GLGISQSSSP WTHQLAETTK QQTSKVGFLF LFSLLGISNL LCNFFKTHLR PKLLDPFLYS LSSQDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.