Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6D01G293800.1 | Wheat | cytosol | 98.46 | 97.71 |
TraesCS6A01G314500.1 | Wheat | cytosol | 97.69 | 96.95 |
EES07561 | Sorghum | cytosol | 83.85 | 83.85 |
Zm00001d018131_P004 | Maize | cytosol | 82.31 | 74.31 |
HORVU6Hr1G077430.1 | Barley | cytosol | 96.15 | 64.77 |
GSMUA_Achr10P... | Banana | cytosol | 65.38 | 64.39 |
KRH16828 | Soybean | cytosol | 63.85 | 60.14 |
GSMUA_Achr7P10040_001 | Banana | cytosol | 29.23 | 58.46 |
AT2G33735.1 | Thale cress | cytosol | 53.08 | 57.98 |
PGSC0003DMT400033584 | Potato | cytosol | 62.31 | 57.86 |
CDY71923 | Canola | cytosol | 46.92 | 57.55 |
VIT_18s0001g07260.t01 | Wine grape | cytosol | 60.77 | 57.25 |
Solyc04g076080.2.1 | Tomato | cytosol | 60.77 | 56.43 |
Bra005476.1-P | Field mustard | cytosol | 50.0 | 53.28 |
CDY17195 | Canola | cytosol | 50.0 | 53.28 |
CDY27949 | Canola | cytosol | 48.46 | 51.64 |
KRH72437 | Soybean | mitochondrion | 58.46 | 49.03 |
Os02t0760000-00 | Rice | cytosol | 85.38 | 46.84 |
TraesCS7B01G498100.1 | Wheat | cytosol | 31.54 | 9.83 |
TraesCS6B01G340100.1 | Wheat | nucleus | 30.77 | 9.01 |
TraesCS7B01G100200.1 | Wheat | cytosol | 29.23 | 8.7 |
Protein Annotations
EnsemblPlants:TraesCS6B01G344500.1 | EnsemblPlantsGene:TraesCS6B01G344500 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005634 | GO:GO:0005737 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 | InterPro:IPR036869 |
InterPro:J_dom_sf | PANTHER:PTHR45504 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 |
SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6B:+:606962236..606964182
Molecular Weight (calculated)
15357.8 Da
IEP (calculated)
4.519
GRAVY (calculated)
-0.784
Length
130 amino acids
Sequence
(BLAST)
(BLAST)
001: MLWEWEDGDE AARTGEEVPV DFDFFSFFEP KDYYKILEVD YDASEETIRS SYIRLALKWH PDKKQGEEKA TSRFQDINEA YQVLSNPVKR QEYDKKGVLY
101: VQDQNAADYL NRHKGLILTC NGLGVRYSVW
101: VQDQNAADYL NRHKGLILTC NGLGVRYSVW
001: MWCSDWGDSH GFDFFDFEDY KDHYKVLELN CDASDDEIRS SFIRLALKWH PDKFKEEDSA TSRFQEINEA YQVLSDPIAR QEYDKKRMRR IYEHNTELLN
101: EYKELILTCN GLGVKHYLW
101: EYKELILTCN GLGVKHYLW
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RYC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.