Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G314500.1 | Wheat | cytosol | 99.24 | 99.24 |
| TraesCS6B01G344500.1 | Wheat | cytosol | 97.71 | 98.46 |
| EES07561 | Sorghum | cytosol | 83.21 | 83.85 |
| Zm00001d018131_P004 | Maize | cytosol | 82.44 | 75.0 |
| HORVU6Hr1G077430.1 | Barley | cytosol | 97.71 | 66.32 |
| GSMUA_Achr10P... | Banana | cytosol | 65.65 | 65.15 |
| KRH16828 | Soybean | cytosol | 64.12 | 60.87 |
| GSMUA_Achr7P10040_001 | Banana | cytosol | 29.77 | 60.0 |
| PGSC0003DMT400033584 | Potato | cytosol | 63.36 | 59.29 |
| VIT_18s0001g07260.t01 | Wine grape | cytosol | 61.83 | 58.7 |
| AT2G33735.1 | Thale cress | cytosol | 52.67 | 57.98 |
| Solyc04g076080.2.1 | Tomato | cytosol | 61.83 | 57.86 |
| CDY71923 | Canola | cytosol | 46.56 | 57.55 |
| Bra005476.1-P | Field mustard | cytosol | 49.62 | 53.28 |
| CDY17195 | Canola | cytosol | 49.62 | 53.28 |
| CDY27949 | Canola | cytosol | 48.09 | 51.64 |
| KRH72437 | Soybean | mitochondrion | 58.78 | 49.68 |
| TraesCS6D01G250300.1 | Wheat | cytosol | 45.8 | 49.59 |
| Os02t0760000-00 | Rice | cytosol | 84.73 | 46.84 |
| TraesCS3D01G201400.2 | Wheat | cytosol | 29.01 | 9.31 |
| TraesCS6D01G289600.1 | Wheat | nucleus | 31.3 | 9.23 |
| TraesCS7D01G196200.1 | Wheat | cytosol | 29.77 | 8.92 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G293800.1 | EnsemblPlantsGene:TraesCS6D01G293800 | Gene3D:1.10.287.110 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45504 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | ScanProsite:PS00636 |
| SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6D:+:404592365..404594007
Molecular Weight (calculated)
15486.0 Da
IEP (calculated)
4.612
GRAVY (calculated)
-0.791
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MLWEWEDGDE AARTGEEVPV DFDFFSFFAK PKDYYKILEV DYDASEETIR SSYIRLALKW HPDKKQDEEK ATSRFQDINE AYQVLSNPVK RQEYDKKGVL
101: YVQDQNAADY LNRHKGLILT CNGLGVRYSV W
101: YVQDQNAADY LNRHKGLILT CNGLGVRYSV W
001: MWCSDWGDSH GFDFFDFEDY KDHYKVLELN CDASDDEIRS SFIRLALKWH PDKFKEEDSA TSRFQEINEA YQVLSDPIAR QEYDKKRMRR IYEHNTELLN
101: EYKELILTCN GLGVKHYLW
101: EYKELILTCN GLGVKHYLW
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RYC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.