Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6A01G264600.1 | Wheat | cytosol | 99.17 | 99.17 |
| HORVU6Hr1G067130.1 | Barley | cytosol | 98.35 | 98.35 |
| Os02t0693200-01 | Rice | cytosol | 84.3 | 84.3 |
| EES05690 | Sorghum | cytosol | 82.64 | 81.97 |
| GSMUA_Achr2P12110_001 | Banana | cytosol | 69.42 | 70.0 |
| VIT_16s0039g01520.t01 | Wine grape | cytosol | 66.12 | 65.04 |
| Zm00001d017685_P006 | Maize | cytosol | 75.21 | 64.54 |
| Bra008607.1-P | Field mustard | cytosol | 57.02 | 61.61 |
| Solyc03g097240.2.1 | Tomato | cytosol | 63.64 | 61.6 |
| PGSC0003DMT400068101 | Potato | cytosol | 63.64 | 61.6 |
| KRH23998 | Soybean | cytosol | 61.98 | 60.98 |
| KRH29318 | Soybean | cytosol | 61.98 | 60.0 |
| CDX78701 | Canola | cytosol | 60.33 | 57.94 |
| CDX70703 | Canola | cytosol | 60.33 | 57.94 |
| CDY49645 | Canola | cytosol | 59.5 | 57.6 |
| CDX69435 | Canola | cytosol | 58.68 | 56.8 |
| Bra021405.1-P | Field mustard | cytosol | 60.33 | 49.66 |
| Bra006363.1-P | Field mustard | cytosol | 57.85 | 48.61 |
| CDY53751 | Canola | cytosol | 61.16 | 47.13 |
| AT5G16650.2 | Thale cress | cytosol | 63.64 | 46.11 |
| TraesCS6D01G293800.1 | Wheat | cytosol | 49.59 | 45.8 |
| CDY33230 | Canola | endoplasmic reticulum, extracellular | 55.37 | 37.64 |
| TraesCS3D01G201400.2 | Wheat | cytosol | 36.36 | 10.78 |
| TraesCS7D01G196200.1 | Wheat | cytosol | 37.19 | 10.3 |
| TraesCS6D01G289600.1 | Wheat | nucleus | 36.36 | 9.91 |
Protein Annotations
| EnsemblPlants:TraesCS6D01G250300.1 | EnsemblPlantsGene:TraesCS6D01G250300 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45292 | PANTHER:PTHR45292:SF2 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| SMART:SM00271 | SUPFAM:SSF46565 | TIGR:cd06257 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr6D:+:353636948..353639923
Molecular Weight (calculated)
14370.8 Da
IEP (calculated)
5.570
GRAVY (calculated)
-0.875
Length
121 amino acids
Sequence
(BLAST)
(BLAST)
001: MDGAIEEPLH KDYYKVLEVD YDASDDNIKL NYRRLALKWH PDKHKGEDDV TAKFQEINEA YKILSDPVTR LEYDFSGCYE VNQYTAREYL SRFKGMILTC
101: NGLGIEHSSK WARHLREWEP H
101: NGLGIEHSSK WARHLREWEP H
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKVGFLF LFSLLGISNL LCNFFKTHLR PKLLDPFLYS LSSQDTV
101: GLGISQSSSP WTHQLAETTK QQTSKVGFLF LFSLLGISNL LCNFFKTHLR PKLLDPFLYS LSSQDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.