CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008607.1-P	Field mustard	cytosol	87.2	97.32
CDX69435	Canola	cytosol	96.8	96.8
CDX70703	Canola	cytosol	90.4	89.68
CDX78701	Canola	cytosol	89.6	88.89
VIT_16s0039g01520.t01	Wine grape	cytosol	69.6	70.73
Solyc03g097240.2.1	Tomato	cytosol	67.2	67.2
KRH23998	Soybean	cytosol	65.6	66.67
GSMUA_Achr2P12110_001	Banana	cytosol	64.0	66.67
PGSC0003DMT400068101	Potato	cytosol	66.4	66.4
AT5G16650.2	Thale cress	cytosol	87.2	65.27
KRH29318	Soybean	cytosol	63.2	63.2
Os02t0693200-01	Rice	cytosol	60.8	62.81
EES05690	Sorghum	cytosol	60.0	61.48
CDY53751	Canola	cytosol	76.0	60.51
TraesCS6D01G250300.1	Wheat	cytosol	57.6	59.5
TraesCS6A01G264600.1	Wheat	cytosol	56.8	58.68
HORVU6Hr1G067130.1	Barley	cytosol	56.8	58.68
CDY33230	Canola	endoplasmic reticulum, extracellular	76.0	53.37
Zm00001d017685_P006	Maize	cytosol	58.4	51.77
CDY71923	Canola	cytosol	40.0	47.17
CDY17195	Canola	cytosol	40.8	41.8
CDY27949	Canola	cytosol	40.0	40.98
CDY65889	Canola	cytosol	24.0	32.97
CDY24259	Canola	cytosol	8.8	22.45
CDX92921	Canola	extracellular, plasma membrane	20.0	12.38
CDY50519	Canola	nucleus	34.4	10.57
CDX96027	Canola	nucleus	34.4	10.49
CDY59029	Canola	nucleus	33.6	10.24
CDY60793	Canola	nucleus	35.2	10.19
CDY16243	Canola	nucleus	35.2	10.07
CDY44905	Canola	nucleus	32.8	10.0
CDX81506	Canola	nucleus	32.8	9.76
CDY24260	Canola	plastid	18.4	9.16
CDY30918	Canola	cytosol	29.6	8.98
CDY45159	Canola	cytosol	29.6	8.96
CDY71746	Canola	endoplasmic reticulum, extracellular	12.0	7.18
CDY50516	Canola	nucleus	20.0	7.1
CDY62617	Canola	extracellular	11.2	7.0
CDY34584	Canola	extracellular, mitochondrion, plasma membrane, vacuole	12.0	6.1
CDY37476	Canola	extracellular, plasma membrane	8.8	4.74
CDY68909	Canola	nucleus	3.2	2.01

Protein Annotations

EnsemblPlants:CDY49645	EnsemblPlantsGene:GSBRNA2T00093513001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR45292	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625	ProteinID:CDY49645
ProteinID:CDY49645.1	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0004EDEFEE	UniProt:A0A078IFG3	MapMan:35.2

Description

BnaC09g41230DBnaC09g41230D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IFG3]

Coordinates

chrLK032850:+:14821..16915

Molecular Weight (calculated)

14644.3 Da

IEP (calculated)

5.644

GRAVY (calculated)

-0.680

Length

125 amino acids

Sequence
(BLAST)

001: MEDHDKSPPP KDYYKILEVD YDATEELIRL NYRKLALKWH PDKHKGDSAA KERFIEINEA YNVLIDPAAR FEYDLTGIYE IHKYTLREYL ARFKGMILTC
101: NGLGISQSFA PWTLQLSETT NKPTD

Best Arabidopsis Sequence Match ( AT5G16650.1 )
(BLAST)

001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.