CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27949	Canola	cytosol	100.0	86.89
CDY17195	Canola	cytosol	96.23	83.61
AT2G33735.1	Thale cress	cytosol	82.08	73.11
PGSC0003DMT400033584	Potato	cytosol	66.04	50.0
VIT_18s0001g07260.t01	Wine grape	cytosol	64.15	49.28
KRH16828	Soybean	cytosol	64.15	49.28
Solyc04g076080.2.1	Tomato	cytosol	64.15	48.57
GSMUA_Achr10P...	Banana	cytosol	60.38	48.48
TraesCS6B01G344500.1	Wheat	cytosol	57.55	46.92
TraesCS6D01G293800.1	Wheat	cytosol	57.55	46.56
EES07561	Sorghum	cytosol	56.6	46.15
TraesCS6A01G314500.1	Wheat	cytosol	56.6	45.8
KRH72437	Soybean	mitochondrion	60.38	41.29
Zm00001d018131_P004	Maize	cytosol	55.66	40.97
CDY49645	Canola	cytosol	47.17	40.0
CDX70703	Canola	cytosol	47.17	39.68
CDX69435	Canola	cytosol	46.23	39.2
CDX78701	Canola	cytosol	45.28	38.1
HORVU2Hr1G049750.1	Barley	cytosol	36.79	37.5
GSMUA_Achr9P15090_001	Banana	cytosol	30.19	32.99
GSMUA_Achr7P10040_001	Banana	cytosol	19.81	32.31
HORVU6Hr1G077430.1	Barley	cytosol	57.55	31.61
CDY53751	Canola	cytosol	45.28	30.57
CDY65889	Canola	cytosol	25.47	29.67
Os02t0760000-00	Rice	cytosol	59.43	26.58
CDY33230	Canola	endoplasmic reticulum, extracellular	41.51	24.72
CDY24259	Canola	cytosol	8.49	18.37
CDX92921	Canola	extracellular, plasma membrane	17.92	9.41
CDY59029	Canola	nucleus	35.85	9.27
CDY44905	Canola	nucleus	34.91	9.02
CDX96027	Canola	nucleus	34.91	9.02
CDY30918	Canola	cytosol	34.91	8.98
CDY45159	Canola	cytosol	34.91	8.96
CDX81506	Canola	nucleus	34.91	8.81
CDY50519	Canola	nucleus	33.02	8.6
CDY16243	Canola	nucleus	33.96	8.24
CDY60793	Canola	nucleus	33.02	8.1
CDY24260	Canola	plastid	16.98	7.17
CDY71746	Canola	endoplasmic reticulum, extracellular	13.21	6.7
CDY62617	Canola	extracellular	10.38	5.5
CDY50516	Canola	nucleus	17.92	5.4
CDY34584	Canola	extracellular, mitochondrion, plasma membrane, vacuole	11.32	4.88
CDY37476	Canola	extracellular, plasma membrane	8.49	3.88
CDY68909	Canola	nucleus	2.83	1.51

Protein Annotations

EnsemblPlants:CDY71923	EnsemblPlantsGene:GSBRNA2T00022515001	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45504	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
ProteinID:CDY71923	ProteinID:CDY71923.1	ScanProsite:PS00636	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0004EE8808
UniProt:A0A078JW97	MapMan:35.2	:	:	:	:

Description

BnaCnng75100DBnaCnng75100D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JW97]

Coordinates

chrLK048154:+:1..951

Molecular Weight (calculated)

13014.1 Da

IEP (calculated)

4.810

GRAVY (calculated)

-1.001

Length

106 amino acids

Sequence
(BLAST)

001: NFDFDNYKDH YKVLELNSDA SDDEIRSNFI RLALKWHPDK LKEEDSATSR FQEINEAYQV LSDPFTREEY DKKRMRRIYE HNMELFDRYK ELIFTCNGLG
101: MNNFLW

Best Arabidopsis Sequence Match ( AT2G33735.1 )
(BLAST)

001: MWCSDWGDSH GFDFFDFEDY KDHYKVLELN CDASDDEIRS SFIRLALKWH PDKFKEEDSA TSRFQEINEA YQVLSDPIAR QEYDKKRMRR IYEHNTELLN
101: EYKELILTCN GLGVKHYLW

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RYC5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.