Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71923 | Canola | cytosol | 86.89 | 100.0 |
| CDY17195 | Canola | cytosol | 96.72 | 96.72 |
| AT2G33735.1 | Thale cress | cytosol | 78.69 | 80.67 |
| PGSC0003DMT400033584 | Potato | cytosol | 60.66 | 52.86 |
| GSMUA_Achr10P... | Banana | cytosol | 55.74 | 51.52 |
| VIT_18s0001g07260.t01 | Wine grape | cytosol | 58.2 | 51.45 |
| KRH16828 | Soybean | cytosol | 58.2 | 51.45 |
| Solyc04g076080.2.1 | Tomato | cytosol | 59.02 | 51.43 |
| EES07561 | Sorghum | cytosol | 52.46 | 49.23 |
| TraesCS6B01G344500.1 | Wheat | cytosol | 51.64 | 48.46 |
| TraesCS6D01G293800.1 | Wheat | cytosol | 51.64 | 48.09 |
| TraesCS6A01G314500.1 | Wheat | cytosol | 50.82 | 47.33 |
| Zm00001d018131_P004 | Maize | cytosol | 50.82 | 43.06 |
| KRH72437 | Soybean | mitochondrion | 54.1 | 42.58 |
| CDY49645 | Canola | cytosol | 40.98 | 40.0 |
| CDX70703 | Canola | cytosol | 40.98 | 39.68 |
| HORVU2Hr1G049750.1 | Barley | cytosol | 33.61 | 39.42 |
| CDX69435 | Canola | cytosol | 40.16 | 39.2 |
| CDX78701 | Canola | cytosol | 39.34 | 38.1 |
| GSMUA_Achr9P15090_001 | Banana | cytosol | 28.69 | 36.08 |
| GSMUA_Achr7P10040_001 | Banana | cytosol | 18.85 | 35.38 |
| HORVU6Hr1G077430.1 | Barley | cytosol | 51.64 | 32.64 |
| CDY53751 | Canola | cytosol | 40.16 | 31.21 |
| CDY65889 | Canola | cytosol | 22.95 | 30.77 |
| Os02t0760000-00 | Rice | cytosol | 54.1 | 27.85 |
| CDY33230 | Canola | endoplasmic reticulum, extracellular | 37.7 | 25.84 |
| CDY24259 | Canola | cytosol | 7.38 | 18.37 |
| CDX92921 | Canola | extracellular, plasma membrane | 16.39 | 9.9 |
| CDY59029 | Canola | nucleus | 31.97 | 9.51 |
| CDX96027 | Canola | nucleus | 31.15 | 9.27 |
| CDY44905 | Canola | nucleus | 31.15 | 9.27 |
| CDY30918 | Canola | cytosol | 31.15 | 9.22 |
| CDY45159 | Canola | cytosol | 31.15 | 9.2 |
| CDX81506 | Canola | nucleus | 31.15 | 9.05 |
| CDY50519 | Canola | nucleus | 29.51 | 8.85 |
| CDY16243 | Canola | nucleus | 30.33 | 8.47 |
| CDY60793 | Canola | nucleus | 29.51 | 8.33 |
| CDY24260 | Canola | plastid | 16.39 | 7.97 |
| CDY71746 | Canola | endoplasmic reticulum, extracellular | 11.48 | 6.7 |
| CDY62617 | Canola | extracellular | 9.84 | 6.0 |
| CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 11.48 | 5.69 |
| CDY50516 | Canola | nucleus | 16.39 | 5.68 |
| CDY37476 | Canola | extracellular, plasma membrane | 9.02 | 4.74 |
| CDY68909 | Canola | nucleus | 2.46 | 1.51 |
Protein Annotations
| Gene3D:1.10.287.110 | MapMan:35.2 | UniProt:A0A078GS04 | EnsemblPlants:CDY27949 | ProteinID:CDY27949 | ProteinID:CDY27949.1 |
| InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | EnsemblPlantsGene:GSBRNA2T00038866001 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf |
| PFAM:PF00226 | PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR45504 | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EE40DB | : | : | : | : |
Description
BnaCnng05340DBnaCnng05340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS04]
Coordinates
chrLK032212:+:472973..474232
Molecular Weight (calculated)
14798.1 Da
IEP (calculated)
4.700
GRAVY (calculated)
-0.881
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MWCSGWGDGH GSFLDFNFDF DNYKDHYKVL ELNSDASDDE IRSNFIRLAL KWHPDKLKEE DSATSRFQEI NEAYQVLSDP FTREEYDKKR MRRIYEHNME
101: LFDRYKELIF TCNGLGMNNF LW
101: LFDRYKELIF TCNGLGMNNF LW
001: MWCSDWGDSH GFDFFDFEDY KDHYKVLELN CDASDDEIRS SFIRLALKWH PDKFKEEDSA TSRFQEINEA YQVLSDPIAR QEYDKKRMRR IYEHNTELLN
101: EYKELILTCN GLGVKHYLW
101: EYKELILTCN GLGVKHYLW
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RYC5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.