Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX78701 | Canola | cytosol | 96.83 | 96.83 |
| CDX69435 | Canola | cytosol | 90.48 | 91.2 |
| CDY49645 | Canola | cytosol | 89.68 | 90.4 |
| Bra006363.1-P | Field mustard | cytosol | 86.51 | 75.69 |
| VIT_16s0039g01520.t01 | Wine grape | cytosol | 69.05 | 70.73 |
| Solyc03g097240.2.1 | Tomato | cytosol | 67.46 | 68.0 |
| PGSC0003DMT400068101 | Potato | cytosol | 66.67 | 67.2 |
| AT5G16650.2 | Thale cress | cytosol | 88.89 | 67.07 |
| GSMUA_Achr2P12110_001 | Banana | cytosol | 63.49 | 66.67 |
| KRH23998 | Soybean | cytosol | 63.49 | 65.04 |
| KRH29318 | Soybean | cytosol | 62.7 | 63.2 |
| Os02t0693200-01 | Rice | cytosol | 60.32 | 62.81 |
| CDY53751 | Canola | cytosol | 77.78 | 62.42 |
| EES05690 | Sorghum | cytosol | 59.52 | 61.48 |
| TraesCS6D01G250300.1 | Wheat | cytosol | 57.94 | 60.33 |
| TraesCS6A01G264600.1 | Wheat | cytosol | 57.14 | 59.5 |
| HORVU6Hr1G067130.1 | Barley | cytosol | 57.14 | 59.5 |
| CDY33230 | Canola | endoplasmic reticulum, extracellular | 77.78 | 55.06 |
| Zm00001d017685_P006 | Maize | cytosol | 57.94 | 51.77 |
| CDY71923 | Canola | cytosol | 39.68 | 47.17 |
| CDY17195 | Canola | cytosol | 40.48 | 41.8 |
| CDY27949 | Canola | cytosol | 39.68 | 40.98 |
| CDY65889 | Canola | cytosol | 23.81 | 32.97 |
| CDY24259 | Canola | cytosol | 8.73 | 22.45 |
| CDX92921 | Canola | extracellular, plasma membrane | 20.63 | 12.87 |
| CDY50519 | Canola | nucleus | 34.92 | 10.81 |
| CDX96027 | Canola | nucleus | 34.92 | 10.73 |
| CDY59029 | Canola | nucleus | 34.13 | 10.49 |
| CDY44905 | Canola | nucleus | 34.13 | 10.49 |
| CDY60793 | Canola | nucleus | 34.92 | 10.19 |
| CDY16243 | Canola | nucleus | 34.92 | 10.07 |
| CDX81506 | Canola | nucleus | 33.33 | 10.0 |
| CDY24260 | Canola | plastid | 18.25 | 9.16 |
| CDY30918 | Canola | cytosol | 29.37 | 8.98 |
| CDY45159 | Canola | cytosol | 29.37 | 8.96 |
| CDY71746 | Canola | endoplasmic reticulum, extracellular | 11.9 | 7.18 |
| CDY50516 | Canola | nucleus | 19.84 | 7.1 |
| CDY62617 | Canola | extracellular | 11.11 | 7.0 |
| CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 11.9 | 6.1 |
| CDY37476 | Canola | extracellular, plasma membrane | 8.73 | 4.74 |
| CDY68909 | Canola | nucleus | 2.38 | 1.51 |
Protein Annotations
| EnsemblPlants:CDX70703 | EnsemblPlantsGene:GSBRNA2T00140568001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
| InterPro:J_dom_sf | PANTHER:PTHR45292 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDX70703 |
| ProteinID:CDX70703.1 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EED60D | MapMan:35.2 | : |
Description
BnaC03g07870D
Coordinates
chrLK031791:-:1624477..1626478
Molecular Weight (calculated)
14733.2 Da
IEP (calculated)
4.982
GRAVY (calculated)
-0.768
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDNDKSPSP KDYYKILEVD YDATEELIRL NYRKLALKWH PDKHKGDSAA TERFIEINDA YNVLMDPDAR FEYDLTGIYE IHKYTLREYL ARFKGMILTC
101: NGLGISQSSS LWTHQLSETT NKTTTD
101: NGLGISQSSS LWTHQLSETT NKTTTD
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.