Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra033942.1-P | Field mustard | nucleus | 99.02 | 99.02 |
| CDX81506 | Canola | nucleus | 98.29 | 95.95 |
| CDX96027 | Canola | nucleus | 93.17 | 93.17 |
| CDY59029 | Canola | nucleus | 93.17 | 93.17 |
| KRH35922 | Soybean | nucleus | 83.66 | 83.66 |
| KRG90857 | Soybean | nucleus | 83.17 | 83.17 |
| VIT_01s0011g03790.t01 | Wine grape | nucleus | 83.9 | 82.89 |
| PGSC0003DMT400037773 | Potato | cytosol | 83.17 | 82.57 |
| Solyc05g009160.2.1 | Tomato | nucleus | 82.68 | 82.08 |
| Solyc04g007370.2.1 | Tomato | cytosol | 81.95 | 81.16 |
| PGSC0003DMT400015325 | Potato | cytosol | 72.2 | 80.87 |
| GSMUA_Achr8P31640_001 | Banana | cytosol | 78.05 | 78.43 |
| Os01t0512100-01 | Rice | plasma membrane | 77.07 | 78.41 |
| TraesCS3D01G201400.2 | Wheat | cytosol | 77.8 | 78.19 |
| TraesCS3A01G202200.1 | Wheat | cytosol | 77.8 | 78.19 |
| Zm00001d041627_P002 | Maize | mitochondrion, plasma membrane | 76.83 | 77.4 |
| EES16141 | Sorghum | nucleus | 76.83 | 77.21 |
| HORVU3Hr1G042500.2 | Barley | plastid | 77.07 | 67.67 |
| CDY65889 | Canola | cytosol | 13.17 | 59.34 |
| CDY24259 | Canola | cytosol | 7.07 | 59.18 |
| CDY50519 | Canola | nucleus | 55.37 | 55.77 |
| CDY60793 | Canola | nucleus | 57.32 | 54.4 |
| CDY16243 | Canola | nucleus | 57.56 | 54.0 |
| CDY45159 | Canola | cytosol | 49.51 | 49.15 |
| CDY30918 | Canola | cytosol | 49.02 | 48.79 |
| CDY50516 | Canola | nucleus | 40.24 | 46.88 |
| CDY68909 | Canola | nucleus | 21.46 | 44.22 |
| CDY71746 | Canola | endoplasmic reticulum, extracellular | 21.95 | 43.06 |
| CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 21.95 | 36.59 |
| CDY71923 | Canola | cytosol | 9.02 | 34.91 |
| CDX78701 | Canola | cytosol | 10.49 | 34.13 |
| CDX70703 | Canola | cytosol | 10.49 | 34.13 |
| CDY62617 | Canola | extracellular | 16.1 | 33.0 |
| CDX69435 | Canola | cytosol | 10.0 | 32.8 |
| CDY49645 | Canola | cytosol | 10.0 | 32.8 |
| CDY27949 | Canola | cytosol | 9.27 | 31.15 |
| CDY17195 | Canola | cytosol | 9.27 | 31.15 |
| CDY37476 | Canola | extracellular, plasma membrane | 17.07 | 30.17 |
| CDY53751 | Canola | cytosol | 10.73 | 28.03 |
| CDY33230 | Canola | endoplasmic reticulum, extracellular | 10.73 | 24.72 |
| Os03t0262500-01 | Rice | plasma membrane, plastid | 7.32 | 16.04 |
| CDX92921 | Canola | extracellular, plasma membrane | 7.56 | 15.35 |
| CDY24260 | Canola | plastid | 8.54 | 13.94 |
Protein Annotations
| EnsemblPlants:CDY44905 | EnsemblPlantsGene:GSBRNA2T00081061001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:DnaJ_domain_CS | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | ncoils:Coil | PANTHER:PTHR44272 | PFAM:PF00226 | PFscan:PS50076 |
| PRINTS:PR00625 | ProteinID:CDY44905 | ProteinID:CDY44905.1 | ScanProsite:PS00636 | SEG:seg | SMART:SM00271 |
| SUPFAM:SSF46565 | UniParc:UPI0004EE8EFD | UniProt:A0A078I218 | MapMan:26.3.1.3 | : | : |
Description
BnaA02g13770DBnaA02g13770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I218]
Coordinates
chrLK032605:+:214195..216205
Molecular Weight (calculated)
45232.8 Da
IEP (calculated)
6.114
GRAVY (calculated)
-0.582
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSKKAEGSS SPATRRDPYE VLSVSRTASD QEIKSSYRKL ALKYHPDKNA NNPDASELFK EVAYSYSILS DPDKRRQYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT SVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSAAQ SKFKLLYFEQ DSSGGYGLAL
201: QEESEKTGKV TSAGMYFLHF QVYRMDSTIN ALAVAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TENLKEIEAQ
301: ILRKRNDLRL FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDSIHSSF SVVKTPSGSN LSNGSSSKAQ GDESKGDGDS VGEEGGSESR DKSKRKWFNL
401: NLKGSDKKVG
101: GTVNTMFAAL FSKLGVPIKT SVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSAAQ SKFKLLYFEQ DSSGGYGLAL
201: QEESEKTGKV TSAGMYFLHF QVYRMDSTIN ALAVAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TENLKEIEAQ
301: ILRKRNDLRL FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDSIHSSF SVVKTPSGSN LSNGSSSKAQ GDESKGDGDS VGEEGGSESR DKSKRKWFNL
401: NLKGSDKKVG
001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG
Arabidopsis Description
ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.