Factsheet for Zm00001d041627_P002

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES16141	Sorghum	nucleus	97.3	97.06
Os01t0512100-01	Rice	plasma membrane	90.91	91.81
TraesCS3D01G201400.2	Wheat	cytosol	89.43	89.22
TraesCS3A01G202200.1	Wheat	cytosol	89.43	89.22
GSMUA_Achr8P31640_001	Banana	cytosol	82.56	82.35
VIT_01s0011g03790.t01	Wine grape	nucleus	80.1	78.55
KRH35922	Soybean	nucleus	78.87	78.29
KRG90857	Soybean	nucleus	78.87	78.29
PGSC0003DMT400037773	Potato	cytosol	79.12	77.97
HORVU3Hr1G042500.2	Barley	plastid	89.43	77.94
Solyc04g007370.2.1	Tomato	cytosol	78.62	77.29
Solyc05g009160.2.1	Tomato	nucleus	78.38	77.24
CDY44905	Canola	nucleus	77.4	76.83
Bra033942.1-P	Field mustard	nucleus	77.15	76.59
CDY59029	Canola	nucleus	76.9	76.34
CDX96027	Canola	nucleus	76.9	76.34
PGSC0003DMT400015325	Potato	cytosol	68.3	75.96
Bra004301.1-P	Field mustard	nucleus	75.18	75.93
AT1G68370.1	Thale cress	nucleus	76.41	75.85
CDX81506	Canola	nucleus	76.9	74.52
Zm00001d017995_P003	Maize	nucleus	54.79	49.67
Zm00001d037257_P001	Maize	cytosol	51.11	49.06
Zm00001d017685_P006	Maize	cytosol	12.04	34.75
Zm00001d018131_P004	Maize	cytosol	8.85	25.0
Os03t0262500-01	Rice	plasma membrane, plastid	7.37	16.04

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100282943	MapMan:26.3.1.3	UniProt:B4FR07	EMBL:BT039545	EMBL:BT043130
ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	EMBL:EU962897	GO:GO:0008150	GO:GO:0009605
GO:GO:0009606	GO:GO:0009628	GO:GO:0009958	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
ProteinID:ONM33404.1	ProteinID:ONM33405.1	PFAM:PF00226	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076
PANTHER:PTHR44272	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI00017B7A96	EnsemblPlantsGene:Zm00001d041627	EnsemblPlants:Zm00001d041627_P002
EnsemblPlants:Zm00001d041627_T002	:	:	:	:	:

Description

Chaperone protein dnaJ 15

Coordinates

chr3:-:130023580..130034797

Molecular Weight (calculated)

45549.7 Da

IEP (calculated)

6.043

GRAVY (calculated)

-0.575

Length

407 amino acids

Sequence
(BLAST)

001: MSSSGKMEGP SAPVVRRDPY EVLSVPRDSS DQEIKSAYRK LALKYHPDKN ASNPEASELF KEVAYSYSIL SDPEKRRQYD TAGFEELENE GMDMEIDLSN
101: LGTVNTMFAA LFSKLGVPIK TTISPTVLEE AMNGTVTVRP LPVGTSATGK VDKQCAHFFG VTISEEQAHS GMVVRVTSPA QSKFKLLYFE QEVNGGYGLA
201: LQEDSQKTGK VTSAGMYFLH FQVYRMDSTA NALAMAKDPE AAFFKRLEGL QPCEVSALKS GTHIFAVYGD NFFKPASYMI EAMCAKSYED TTERLKEIES
301: KILAKRNDLR QFETEYRKAL ARFQEVTNRY TQEREAVDDM LRERDNIHCS FTTERTLANP VGVGSSSRYT IEQSIPESPE NGSVDGRDKS GKKKWFNLNL
401: NRSDKKA

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.