Factsheet for TraesCS3D01G201400.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G202200.1	Wheat	cytosol	98.77	98.77
Os01t0512100-01	Rice	plasma membrane	92.16	93.3
EES16141	Sorghum	nucleus	90.93	90.93
Zm00001d041627_P002	Maize	mitochondrion, plasma membrane	89.22	89.43
HORVU3Hr1G042500.2	Barley	plastid	97.06	84.8
GSMUA_Achr8P31640_001	Banana	cytosol	81.37	81.37
KRH35922	Soybean	nucleus	79.41	79.02
Solyc04g007370.2.1	Tomato	cytosol	80.15	78.99
KRG90857	Soybean	nucleus	78.92	78.54
VIT_01s0011g03790.t01	Wine grape	nucleus	79.66	78.31
CDY44905	Canola	nucleus	78.19	77.8
PGSC0003DMT400015325	Potato	cytosol	69.61	77.6
Bra033942.1-P	Field mustard	nucleus	77.94	77.56
CDX96027	Canola	nucleus	77.94	77.56
CDY59029	Canola	nucleus	77.94	77.56
PGSC0003DMT400037773	Potato	cytosol	78.19	77.24
Bra004301.1-P	Field mustard	nucleus	76.23	77.17
Solyc05g009160.2.1	Tomato	nucleus	77.94	77.0
AT1G68370.1	Thale cress	nucleus	76.96	76.59
CDX81506	Canola	nucleus	77.7	75.48
TraesCS6D01G289600.1	Wheat	nucleus	56.62	52.03
TraesCS7D01G196200.1	Wheat	cytosol	54.41	50.8
TraesCS6D01G250300.1	Wheat	cytosol	10.78	36.36
TraesCS6D01G293800.1	Wheat	cytosol	9.31	29.01
Os03t0262500-01	Rice	plasma membrane, plastid	7.11	15.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	ncoils:Coil	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0008150
GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PFAM:PF00226	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44272
SMART:SM00271	SUPFAM:SSF46565	EnsemblPlantsGene:TraesCS3D01G201400	EnsemblPlants:TraesCS3D01G201400.2	TIGR:cd06257	SEG:seg

Description

No Description!

Coordinates

chr3D:+:239349783..239362145

Molecular Weight (calculated)

45608.6 Da

IEP (calculated)

5.801

GRAVY (calculated)

-0.584

Length

408 amino acids

Sequence
(BLAST)

001: MASSGKMEGP SAPALRRDPY EVLSVSRDSS DQEIKSAYRK LALKYHPDKN ASNPEASELF KEVAYSYSIL SDPEKRRQYD TAGFEALENE GMDMEIDLSN
101: LGTVNTMFAA LFSKLGVPIK TTVSPTVLEE AMNGTVTVRP LPVGTSAMGK VEKQSAHFFG VTISEEQAHS GIVVRATSVA QSKFKLLFFE QEINGGYGLA
201: LQEDSQKTGK VTSAGMYFLH FQVYRMDSTV NALAMAKDPE AAFFKRLEGL QPCEVSTLKP GTHIFAVYGD NFFKPASYTI EAMCAKSYED TTERLKEIEA
301: KILEKRNDLR QFETEYRKAL AQFQEATARY TQEKEVVDDM LRERDDIHSS FTTERTITSS LGAGSSSSRY PVEQNKTESP ENGNIDSRDK SSKKKWFNLN
401: LNRSDKRA

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.