Factsheet for Bra004301.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX96027	Canola	nucleus	100.0	98.29
AT1G68370.1	Thale cress	nucleus	94.29	92.68
Bra033942.1-P	Field mustard	nucleus	93.05	91.46
KRH35922	Soybean	nucleus	84.12	82.68
KRG90857	Soybean	nucleus	83.62	82.2
VIT_01s0011g03790.t01	Wine grape	nucleus	83.37	80.96
PGSC0003DMT400037773	Potato	cytosol	81.89	79.9
Solyc04g007370.2.1	Tomato	cytosol	81.64	79.47
Solyc05g009160.2.1	Tomato	nucleus	81.39	79.42
PGSC0003DMT400015325	Potato	cytosol	70.97	78.14
TraesCS3A01G202200.1	Wheat	cytosol	77.42	76.47
TraesCS3D01G201400.2	Wheat	cytosol	77.17	76.23
Os01t0512100-01	Rice	plasma membrane	76.18	76.18
GSMUA_Achr8P31640_001	Banana	cytosol	76.92	75.98
EES16141	Sorghum	nucleus	76.67	75.74
Zm00001d041627_P002	Maize	mitochondrion, plasma membrane	75.93	75.18
HORVU3Hr1G042500.2	Barley	plastid	76.67	66.17
Bra024636.1-P	Field mustard	nucleus	57.57	53.7
Bra027824.1-P	Field mustard	nucleus	50.12	48.79
Bra008607.1-P	Field mustard	cytosol	10.17	36.61
Bra021405.1-P	Field mustard	cytosol	11.41	31.29
Bra005476.1-P	Field mustard	cytosol	9.43	31.15
Bra016320.1-P	Field mustard	plastid	29.53	31.07
Bra006363.1-P	Field mustard	cytosol	10.67	29.86
Os03t0262500-01	Rice	plasma membrane, plastid	7.2	15.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	EnsemblPlantsGene:Bra004301	EnsemblPlants:Bra004301.1	EnsemblPlants:Bra004301.1-P	ncoils:Coil
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628
GO:GO:0009958	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4CJB7	PFAM:PF00226
PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44272	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0002541740	SEG:seg	:	:	:	:

Description

AT1G68370 (E=8e-189) ARG1 | ARG1 (ALTERED RESPONSE TO GRAVITY 1); cytoskeletal protein binding

Coordinates

chrA07:-:17853697..17855837

Molecular Weight (calculated)

44393.0 Da

IEP (calculated)

6.114

GRAVY (calculated)

-0.567

Length

403 amino acids

Sequence
(BLAST)

001: MSSKKVEGSS APANRRDPYE VLSVARDATD QEIKSAYRKL ALKYHPDKNA NNPEASDLFK EVAFSYSILS DPEKRRQYDN AGFEALDADG MEMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEESEKTGKV TSAGMYFLHF QVYRMDSTVN ALAAAKDPES AFFKRLEGLQ PCEVSELRAG THIFAVYGDN FFKTASYTIE ALCAKTYEET TEKLKEIEAQ
301: ILRKRNDLRQ ALARFQEVTT RYTQEKQTVD ELLKQRDSIH SSFSVVKTPS GNNLSNGSSS KAQGDEPKGE GDSAGEEGGA ESRDKSKRKW FNLNIKGSDK
401: KLG

Best Arabidopsis Sequence Match ( AT1G68370.1 )
(BLAST)

001: MSAKKLEGSS APANRRDPYE VLCVSKDAND QEIKSAYRKL ALKYHPDKNA NNPDASELFK EVAFSYSILS DPEKRRHYDN AGFEALDADG MDMEIDLSNL
101: GTVNTMFAAL FSKLGVPIKT TVSANVLEEA MNGTVTVRPL PIGTSVSGKV EKQCAHFFGV TISEQQAESG VVVRVTSTAQ SKFKLLYFEQ DSSGGYGLAL
201: QEEREKTGKV TSAGMYFLHF QVYRMDTTVN ALAAAKDPES AFFKRLEGLQ PCEVSELKAG THIFAVYGDN FFKTASYTIE ALCAKTYEDT TEKLKEIEAQ
301: ILRKRNELRQ FETEYRKALA RFQEVTNRYT QEKQTVDELL KQRDTIHSTF SVVKTPSGNN LSNGSSSKAQ GDESKGDGDS AGEEGGTENR DKSKRKWFNL
401: NLKGSDKKLG

Arabidopsis Description

ATJ15At1g68370 [Source:UniProtKB/TrEMBL;Acc:Q1H5A8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.