Factsheet for Bra024636.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60793	Canola	nucleus	99.07	99.07
CDY16243	Canola	nucleus	99.77	98.63
CDY24259	Canola	cytosol	10.42	91.84
AT1G24120.1	Thale cress	nucleus	91.67	90.83
CDY65889	Canola	cytosol	18.06	85.71
VIT_01s0026g00840.t01	Wine grape	cytosol	71.53	75.74
KRH69469	Soybean	nucleus	69.44	72.64
KRH74687	Soybean	nucleus	68.29	71.95
PGSC0003DMT400040316	Potato	nucleus	68.52	71.84
Solyc05g006240.2.1	Tomato	nucleus	68.98	71.46
Bra027824.1-P	Field mustard	nucleus	59.03	61.59
Bra016320.1-P	Field mustard	plastid	52.31	59.01
Bra004301.1-P	Field mustard	nucleus	53.7	57.57
Bra033942.1-P	Field mustard	nucleus	54.17	57.07
Bra008607.1-P	Field mustard	cytosol	9.72	37.5
Bra006363.1-P	Field mustard	cytosol	10.19	30.56
Bra021405.1-P	Field mustard	cytosol	10.19	29.93
Bra005476.1-P	Field mustard	cytosol	8.33	29.51

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	EnsemblPlantsGene:Bra024636	EnsemblPlants:Bra024636.1	EnsemblPlants:Bra024636.1-P	ncoils:Coil
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0008150	GO:GO:0009719	GO:GO:0009737	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	UniProt:M4E781	PFAM:PF00226	PRINTS:PR00625	ScanProsite:PS00636
PFscan:PS50076	PANTHER:PTHR44272	PANTHER:PTHR44272:SF2	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000254219B
SEG:seg	:	:	:	:	:

Description

AT1G24120 (E=2e-183) ARL1 | ARL1 (ARG1-LIKE 1); heat shock protein binding / unfolded protein binding

Coordinates

chrA09:+:23893250..23895810

Molecular Weight (calculated)

48848.6 Da

IEP (calculated)

7.106

GRAVY (calculated)

-0.644

Length

432 amino acids

Sequence
(BLAST)

001: MAANRSKSEK QLRRDPYEVL GVLKSSTDQE IKSAYRKLAL KYHPDKTAND PVAADMFKEV TFSYNILSDP EKRRQYDTAG FEAVEAEGQE LELDLSSLGA
101: VNTVFAALFS KLGVPIKTSV SATILEEALN GRVSVDPLLL GQAVTKKVEK QCAHFYAVTV TEEEVSSGLV CRVESSSKSK FKLLYFDQEA NSGLSLALQE
201: DSKRTGKITS AGMYFLGFPV YRLDHTNNSM AQAKDPETAF FKKLDGFQQC ELTELKAGTH VFAVYGDNFF KSVNYTIQVL CAASFTQEKE DLRSVEAQIL
301: TKRAELAKFE TEYREVLVQF TDMTSRYAQE MQSIDELLKQ RNEIHSAYTT APVIKRSSSK NRLNRLRRNS FKKAAAEAPA PTEQEEEEDE EEEEESSRER
401: NKKPSPSDKS ETLKKKSKWY KLHLKLDKKK PC

Best Arabidopsis Sequence Match ( AT1G24120.1 )
(BLAST)

001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC

Arabidopsis Description

ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.