Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- endoplasmic reticulum 1
- golgi 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
KRH69469 | Soybean | nucleus | 97.07 | 96.37 |
VIT_01s0026g00840.t01 | Wine grape | cytosol | 80.0 | 80.39 |
CDY24259 | Canola | cytosol | 9.51 | 79.59 |
PGSC0003DMT400040316 | Potato | nucleus | 78.29 | 77.91 |
Solyc05g006240.2.1 | Tomato | nucleus | 78.05 | 76.74 |
KRH65752 | Soybean | cytosol | 17.32 | 76.34 |
CDY65889 | Canola | cytosol | 16.83 | 75.82 |
GSMUA_Achr3P06010_001 | Banana | cytosol | 71.95 | 70.24 |
CDY50519 | Canola | nucleus | 68.54 | 69.04 |
AT1G24120.1 | Thale cress | nucleus | 73.41 | 69.04 |
CDY60793 | Canola | nucleus | 72.2 | 68.52 |
Bra024636.1-P | Field mustard | nucleus | 71.95 | 68.29 |
CDY16243 | Canola | nucleus | 72.68 | 68.19 |
HORVU6Hr1G076490.9 | Barley | nucleus | 68.54 | 63.72 |
Os02t0741100-01 | Rice | nucleus | 68.54 | 63.57 |
TraesCS6B01G340100.1 | Wheat | nucleus | 68.78 | 63.51 |
EES07283 | Sorghum | nucleus | 68.29 | 63.35 |
TraesCS6D01G289600.1 | Wheat | nucleus | 68.54 | 63.29 |
TraesCS6A01G310200.1 | Wheat | nucleus | 68.05 | 62.84 |
TraesCS7B01G100200.1 | Wheat | cytosol | 65.61 | 61.56 |
TraesCS7D01G196200.1 | Wheat | cytosol | 65.61 | 61.56 |
Zm00001d037257_P001 | Maize | cytosol | 63.41 | 61.32 |
Zm00001d017995_P003 | Maize | nucleus | 67.07 | 61.25 |
TraesCS7A01G194600.1 | Wheat | cytosol | 65.12 | 61.1 |
EER89501 | Sorghum | cytosol | 66.1 | 61.04 |
HORVU7Hr1G039640.19 | Barley | cytosol | 63.9 | 59.41 |
KRH35922 | Soybean | nucleus | 59.02 | 59.02 |
KRG90857 | Soybean | nucleus | 58.29 | 58.29 |
CDY50516 | Canola | nucleus | 48.29 | 56.25 |
GSMUA_Achr9P14460_001 | Banana | cytosol, nucleus, plastid | 69.02 | 55.27 |
CDY68909 | Canola | nucleus | 25.37 | 52.26 |
TraesCS7B01G498100.1 | Wheat | cytosol | 48.54 | 47.72 |
KRH49472 | Soybean | cytosol | 33.17 | 47.39 |
Bra016320.1-P | Field mustard | plastid | 38.29 | 40.99 |
KRH23998 | Soybean | cytosol | 11.95 | 39.84 |
KRH29318 | Soybean | cytosol | 11.46 | 37.6 |
KRH16828 | Soybean | cytosol | 9.27 | 27.54 |
KRH72437 | Soybean | mitochondrion | 9.27 | 24.52 |
Protein Annotations
Gene3D:1.10.287.110 | EntrezGene:100791554 | MapMan:26.3.1.3 | EMBL:ACUP02000061 | ncoils:Coil | InterPro:DnaJ_domain |
InterPro:DnaJ_domain_CS | EnsemblPlantsGene:GLYMA_01G036500 | InterPro:IPR001623 | InterPro:IPR036869 | InterPro:J_dom_sf | UniProt:K7K1L7 |
EnsemblPlants:KRH74687 | ProteinID:KRH74687 | ProteinID:KRH74687.1 | ProteinID:KRH74688.1 | ProteinID:KRH74689.1 | PFAM:PF00226 |
PRINTS:PR00625 | ScanProsite:PS00636 | PFscan:PS50076 | PANTHER:PTHR44272 | PANTHER:PTHR44272:SF2 | SMART:SM00271 |
SUPFAM:SSF46565 | UniParc:UPI0002337514 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr1:-:3821377..3825854
Molecular Weight (calculated)
46257.6 Da
IEP (calculated)
8.967
GRAVY (calculated)
-0.694
Length
410 amino acids
Sequence
(BLAST)
(BLAST)
001: MPGHRSKSEK HGGGGEKPLR RDPYEVLGIS RNSTDQEIKT AYRKMALKYH PDKNANDPKA ADMFKEATFS YNILSDPDKR RQYDSAGFEA VESDNQELEL
101: DLSSLGAVNT MFAALFSKLG VPIKTTVSAT VLEEALNGLV TIRPLPLGHN IAKRVEKQCA HFYSVTITEE EAQAGFVCRV QSPDKSKFKL LYFDQEDNSG
201: LSLALQEDSA KTGKVTSAGM YFLGFPVYRL DQTMNSIAAA KDPDTSFFRK LDAFQPCELT ELKAGTHVFA VYGDNFFKSA NYTIEALCAA PFSEEKENLR
301: NIEAQILSKR AEISKFEAEY REVLAQFSDM TNRYAHEMQA IDELLKNRNE IQASYTSAPL KRTTSRSRSK NSAKEAKEDG QAKEKRSTRE RPKKKKWYNL
401: HLRVDKRKAC
101: DLSSLGAVNT MFAALFSKLG VPIKTTVSAT VLEEALNGLV TIRPLPLGHN IAKRVEKQCA HFYSVTITEE EAQAGFVCRV QSPDKSKFKL LYFDQEDNSG
201: LSLALQEDSA KTGKVTSAGM YFLGFPVYRL DQTMNSIAAA KDPDTSFFRK LDAFQPCELT ELKAGTHVFA VYGDNFFKSA NYTIEALCAA PFSEEKENLR
301: NIEAQILSKR AEISKFEAEY REVLAQFSDM TNRYAHEMQA IDELLKNRNE IQASYTSAPL KRTTSRSRSK NSAKEAKEDG QAKEKRSTRE RPKKKKWYNL
401: HLRVDKRKAC
001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC
Arabidopsis Description
ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.