Factsheet for Os02t0741100-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0660200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59980.1	Os06t0660200-01	AT5G57090.1	18047472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07283	Sorghum	nucleus	90.27	90.27
TraesCS6A01G310200.1	Wheat	nucleus	90.05	89.64
TraesCS6D01G289600.1	Wheat	nucleus	90.05	89.64
TraesCS6B01G340100.1	Wheat	nucleus	89.82	89.41
HORVU6Hr1G076490.9	Barley	nucleus	89.14	89.34
Zm00001d017995_P003	Maize	nucleus	89.37	87.97
GSMUA_Achr3P06010_001	Banana	cytosol	72.85	76.67
PGSC0003DMT400040316	Potato	nucleus	67.65	72.57
Solyc05g006240.2.1	Tomato	nucleus	67.42	71.46
VIT_01s0026g00840.t01	Wine grape	cytosol	64.25	69.61
KRH74687	Soybean	nucleus	63.57	68.54
KRH69469	Soybean	nucleus	64.03	68.52
Os06t0237800-01	Rice	cytosol, nucleus	23.76	65.22
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	69.91	60.35
CDY30918	Canola	cytosol	52.71	56.55
AT1G59980.1	Thale cress	nucleus	52.94	56.52
CDY45159	Canola	cytosol	52.71	56.42
Os01t0512100-01	Rice	plasma membrane	51.13	56.08
Bra027824.1-P	Field mustard	nucleus	52.26	55.8
Os02t0693200-01	Rice	cytosol	10.18	37.19
Os02t0760000-00	Rice	cytosol	9.28	17.3
Os03t0262500-01	Rice	plasma membrane, plastid	5.43	12.83

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	EntrezGene:4330683	EMBL:AK068712	ProteinID:BAD15722.1	ProteinID:BAD15765.1
ProteinID:BAF09992.1	ProteinID:BAS80849.1	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	ProteinID:EEE57781.1	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	EnsemblPlantsGene:Os02g0741100	EnsemblPlants:Os02t0741100-01	PFAM:PF00226	PRINTS:PR00625
ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44272	PANTHER:PTHR44272:SF1	UniProt:Q6Z7S3	SMART:SM00271
SUPFAM:SSF46565	UniParc:UPI0000358B4B	RefSeq:XP_015622770.1	SEG:seg	:	:

Description

DnaJ domain protein C21Similar to Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1) (AtJ16) (AtDjB16). (Os02t0741100-01);Similar to Chaperone protein dnaJ 16 (Protein ARG1-LIKE1) (AtARL1) (AtJ16) (AtDjB16). (Os02t0741100-02)

Coordinates

chr2:+:30994374..30998795

Molecular Weight (calculated)

49327.9 Da

IEP (calculated)

9.267

GRAVY (calculated)

-0.683

Length

442 amino acids

Sequence
(BLAST)

001: MAGSKFGSFK SEKGSSAGAA AGAGAAAQRR DPYEVLGVGR NATEQEIKSA FRRMALKYHP DKNADDPVAS DKFQEATFSY NILSDPDKRR QYDSSGFEAI
101: EADSQELELD LSSLNTVNTV FAALFSKLGV PIKTTVSATV LEEALNGSVG ISQLELGQSV FRKVEKQSAH FYSVDITDKE AKMGLVCRVQ STAKSKFKLL
201: YFEPEENGGL SLALQEDSVK TGKVTSAGMF FLGFPVYRFE QNNSVAAAKD PDSAFFKRLD GFQPCEVNEL KAGTHFFAVY GDNFFKSATY NIEVVCAEPF
301: STEKEKLRCV EAKILAKRSE LSKFESEYRE VLAKFTEMTS RYAQEMQTID ELLKERNAIH ASYTNNTTLQ RSSSSNKGKT SSKESKSDDD QTVKKEKKSK
401: SKSMEGSRSD DDGPRKEKKP KERLRRKKWF NIHLKVDKRR PC

Best Arabidopsis Sequence Match ( AT1G24120.1 )
(BLAST)

001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC

Arabidopsis Description

ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.