Factsheet for AT1G59980.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45159	Canola	cytosol	90.34	90.56
CDY30918	Canola	cytosol	89.37	89.81
Bra027824.1-P	Field mustard	nucleus	89.61	89.61
AT1G24120.1	Thale cress	nucleus	62.08	58.95
GSMUA_Achr3P06010_001	Banana	cytosol	58.21	57.38
HORVU6Hr1G076490.9	Barley	nucleus	58.21	54.65
TraesCS6D01G289600.1	Wheat	nucleus	58.45	54.5
TraesCS6A01G310200.1	Wheat	nucleus	58.45	54.5
TraesCS6B01G340100.1	Wheat	nucleus	57.97	54.05
EER89501	Sorghum	cytosol	57.49	53.6
TraesCS7D01G196200.1	Wheat	cytosol	56.52	53.55
TraesCS7B01G100200.1	Wheat	cytosol	56.52	53.55
EES07283	Sorghum	nucleus	57.0	53.39
TraesCS7A01G194600.1	Wheat	cytosol	56.28	53.32
Os02t0741100-01	Rice	nucleus	56.52	52.94
Zm00001d037257_P001	Maize	cytosol	54.11	52.83
Zm00001d017995_P003	Maize	nucleus	57.25	52.78
HORVU7Hr1G039640.19	Barley	cytosol	55.07	51.7
AT1G68370.1	Thale cress	nucleus	49.76	50.24
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	58.7	47.46
TraesCS7B01G498100.1	Wheat	cytosol	43.0	42.69
AT2G33735.1	Thale cress	cytosol	9.66	33.61
AT5G16650.2	Thale cress	cytosol	9.66	23.95

Protein Annotations

Gene3D:1.10.287.110	MapMan:26.3.1.3	EntrezGene:842292	ProteinID:AAD14474.1	ProteinID:AEE33646.1	EMBL:AK118901
ProteinID:ANM58326.1	ArrayExpress:AT1G59980	EnsemblPlantsGene:AT1G59980	RefSeq:AT1G59980	TAIR:AT1G59980	RefSeq:AT1G59980-TAIR-G
EnsemblPlants:AT1G59980.1	TAIR:AT1G59980.1	Symbol:ATDJC39	EMBL:AY226826	Unigene:At.36742	EMBL:BT005502
InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	GO:GO:0005575	GO:GO:0016020	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	RefSeq:NP_001320771.1	RefSeq:NP_176206.2	PFAM:PF00226	PO:PO:0000293	PO:PO:0001078
PO:PO:0001081	PO:PO:0004507	PO:PO:0007611	PO:PO:0009009	PO:PO:0009010	PO:PO:0009030
PO:PO:0025022	PRINTS:PR00625	ScanProsite:PS00636	PFscan:PS50076	PANTHER:PTHR44272	PANTHER:PTHR44272:SF2
UniProt:Q6XL73	SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI000000C682	SEG:seg	:

Description

ATJ39Chaperone protein dnaJ 39 [Source:UniProtKB/Swiss-Prot;Acc:Q6XL73]

Coordinates

chr1:+:22080689..22083651

Molecular Weight (calculated)

46787.1 Da

IEP (calculated)

6.431

GRAVY (calculated)

-0.589

Length

414 amino acids

Sequence
(BLAST)

001: MATHSSRSEN KDAGEEDELR RRNPYEVLGI PSNSTDQEIK SAYRRMALRY HPDKNPDDPV AAEMFKEVTF AYEVLSDPEN RRLYDTTGSE AVGPENEDLE
101: LDLSSLGAVN TIFAALFNKL GVQIKTTVSA NLLGEALNGT VTTLPLMVGQ VVSRKVEKQS AHFYSVTLTE EEAQDGLICK VHSSAKNKFK LLYFDQVENG
201: GLSLALQEDS RKTGKLSTAG LYFFGFPVYR FDHRVNSRAL SRDPETGFFK RLDAFQPFEI TELKAGSHVF AVYGDNFFKS VSYTLEIFSS APFGNEKESL
301: RSTEAQIVSK RTELLKFEAE YHEVFAQFTE MASKCTGEVQ EIDELLKRRN EICAAYTIFP PTKQGSSKSR SWSKKKSSLL MEPREEGEVA VREEGGVKKK
401: KWYNIQLRQD KKKN

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.