Factsheet for TraesCS7B01G498100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS7A01G492400.1
TraesCS7B01G398100.1
TraesCS7D01G478800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59980.1	TraesCS7A01G492400.1	AT5G57090.1	18047472
AT1G59980.1	TraesCS7B01G398100.1	AT5G57090.1	18047472
AT1G59980.1	TraesCS7D01G478800.1	AT5G57090.1	18047472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G100200.1	Wheat	cytosol	54.68	52.17
EER89501	Sorghum	cytosol	55.4	52.03
GSMUA_Achr3P06010_001	Banana	cytosol	52.28	51.9
Zm00001d037257_P001	Maize	cytosol	52.52	51.65
HORVU7Hr1G039640.19	Barley	cytosol	54.44	51.47
TraesCS6B01G340100.1	Wheat	nucleus	53.96	50.68
PGSC0003DMT400040316	Potato	nucleus	48.44	49.03
KRH69469	Soybean	nucleus	48.44	48.91
VIT_01s0026g00840.t01	Wine grape	cytosol	47.72	48.77
KRH74687	Soybean	nucleus	47.72	48.54
Solyc05g006240.2.1	Tomato	nucleus	48.2	48.2
AT1G59980.1	Thale cress	nucleus	42.69	43.0
CDY30918	Canola	cytosol	41.97	42.48
CDY45159	Canola	cytosol	41.97	42.37
Bra027824.1-P	Field mustard	nucleus	41.49	41.79
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	51.08	41.6
TraesCS6B01G344500.1	Wheat	cytosol	9.83	31.54

Protein Annotations

EnsemblPlants:TraesCS7B01G498100.1	EnsemblPlantsGene:TraesCS7B01G498100	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623	InterPro:IPR036869
InterPro:J_dom_sf	PANTHER:PTHR44272	PANTHER:PTHR44272:SF1	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SMART:SM00271	SUPFAM:SSF46565	TIGR:cd06257	MapMan:26.3.1.3	:	:

Description

No Description!

Coordinates

chr7B:+:749048205..749052631

Molecular Weight (calculated)

47000.8 Da

IEP (calculated)

8.299

GRAVY (calculated)

-0.573

Length

417 amino acids

Sequence
(BLAST)

001: MTGGGQRDQR FHDAAQARIP HHANQADTLK LVVADARLQR DVPVRRPQRK DLYEVLEVGR SATDEEIKKA FHRMALKYHP DKNGDDPVAF DIFLEIQFAH
101: SILSDPSKRR QYDKSGFEAI ESDRPKSDLD LSNLSPASTM FVALLSKFGV PIKTTVPVAV LKEALDRSVK VFQLQLGQSE RRKVEKLSAN YYAVDITERD
201: AKAGLVCRVH SPDGSKFKLL YFTCEENGGL DLALKEDSVD TGNGTSAGMY FLGFPVYRFQ HNYSPAVIKN SHTVLLKMLD SFQSCDVNEL TPGTHYFAVY
301: GDNFFRPASY IIEFMCGQSF SAEKEKLKNV EAMILAKQAA YREVSPNLTE MKRGYTKDMP TIDELLKERN EIHASFSTNN SPPTMQKKAK DHPTEGEHDN
401: SGDKKTNGKK RLFPSFL

Best Arabidopsis Sequence Match ( AT1G24120.1 )
(BLAST)

001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC

Arabidopsis Description

ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.