Factsheet for HORVU7Hr1G039640.19

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU7Hr1G110470.7

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59980.1	HORVU7Hr1G110470.7	AT5G57090.1	18047472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G196200.1	Wheat	cytosol	90.7	91.53
TraesCS7B01G100200.1	Wheat	cytosol	90.7	91.53
TraesCS7A01G194600.1	Wheat	cytosol	89.34	90.16
EER89501	Sorghum	cytosol	79.59	79.05
Zm00001d037257_P001	Maize	cytosol	75.96	79.01
HORVU6Hr1G076490.9	Barley	nucleus	73.47	73.47
GSMUA_Achr3P06010_001	Banana	cytosol	65.53	68.81
PGSC0003DMT400040316	Potato	nucleus	62.13	66.5
Solyc05g006240.2.1	Tomato	nucleus	62.59	66.19
VIT_01s0026g00840.t01	Wine grape	cytosol	60.32	65.2
KRH69469	Soybean	nucleus	60.54	64.65
KRH74687	Soybean	nucleus	59.41	63.9
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	63.95	55.08
AT1G59980.1	Thale cress	nucleus	51.7	55.07
TraesCS7B01G498100.1	Wheat	cytosol	51.47	54.44
CDY30918	Canola	cytosol	50.34	53.88
CDY45159	Canola	cytosol	50.34	53.75
Bra027824.1-P	Field mustard	nucleus	49.89	53.14
HORVU3Hr1G042500.2	Barley	plastid	49.21	46.47
HORVU6Hr1G067130.1	Barley	cytosol	9.75	35.54
HORVU2Hr1G049750.1	Barley	cytosol	6.12	25.96
HORVU6Hr1G077430.1	Barley	cytosol	8.84	20.21

Protein Annotations

EnsemblPlants:HORVU7Hr1G039640.19	EnsemblPlantsGene:HORVU7Hr1G039640	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	ncoils:Coil	PANTHER:PTHR44272	PANTHER:PTHR44272:SF1	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI000B471644	UniProt:A0A287W5A9	MapMan:26.3.1.3	:	:	:

Description

No Description!

Coordinates

chrchr7H:+:105059713..105065876

Molecular Weight (calculated)

46390.4 Da

IEP (calculated)

6.341

GRAVY (calculated)

-0.613

Length

441 amino acids

Sequence
(BLAST)

001: MAGSRFGSFK SDKGDSAAAA AAPPQRKDPY EVLGVARTAT DQEIKSAFRR MALKYHPDKN ADDPVASEMF QEVTFSYSIL SDPHKRRQYD TSGFEAIETD
101: SQELELDLSS LNTVNTMFAA IFSKLGVPIK TTVSATVLEE ALNGSIVVSQ LQLGNAVRKK VEKQTAHFYS VDITEQEAKK GLVCRVHSTD KSKFKLLYFE
201: LEENGGLSLA LQEDSVKAGK VSSAGMYFLG FPVYRFEQNN SAPAAKDPDS AFFKRLDSFQ PCDINELKPG THFFAVYGDN FFKTASYTIE VVCAESFPXE
301: KEKLQHVEAK ILTKRAELSK FESEYREVLA KFTEMTSKYT QEMQTIDELL NERNVIHASY TNNPPLKRTP SRNKSKSSPS FKFDEEKNQR KEKKAKDQHM
401: EGCGSEDDES SEKKXXXXXX XXXXXXXXXX XXXXXXXXXX X

Best Arabidopsis Sequence Match ( AT1G24120.1 )
(BLAST)

001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC

Arabidopsis Description

ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.