Factsheet for Bra027824.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 2
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002763.1-P
Bra006834.1-P
Bra035648.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G59980.1	Bra002763.1-P	AT5G57090.1	18047472
AT1G59980.1	Bra006834.1-P	AT5G57090.1	18047472
AT1G59980.1	Bra035648.1-P	AT5G57090.1	18047472

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45159	Canola	cytosol	98.55	98.79
CDY30918	Canola	cytosol	97.34	97.82
AT1G59980.1	Thale cress	nucleus	89.61	89.61
Bra024636.1-P	Field mustard	nucleus	61.59	59.03
GSMUA_Achr3P06010_001	Banana	cytosol	57.97	57.14
HORVU6Hr1G076490.9	Barley	nucleus	56.76	53.29
TraesCS6D01G289600.1	Wheat	nucleus	57.0	53.15
TraesCS6A01G310200.1	Wheat	nucleus	57.0	53.15
TraesCS6B01G340100.1	Wheat	nucleus	56.52	52.7
Os02t0741100-01	Rice	nucleus	55.8	52.26
EER89501	Sorghum	cytosol	56.04	52.25
EES07283	Sorghum	nucleus	55.56	52.04
TraesCS7D01G196200.1	Wheat	cytosol	54.83	51.95
TraesCS7B01G100200.1	Wheat	cytosol	54.83	51.95
TraesCS7A01G194600.1	Wheat	cytosol	54.59	51.72
Zm00001d037257_P001	Maize	cytosol	52.9	51.65
Zm00001d017995_P003	Maize	nucleus	55.31	51.0
Bra004301.1-P	Field mustard	nucleus	48.79	50.12
HORVU7Hr1G039640.19	Barley	cytosol	53.14	49.89
Bra033942.1-P	Field mustard	nucleus	48.55	49.02
GSMUA_Achr9P14460_001	Banana	cytosol, nucleus, plastid	58.7	47.46
TraesCS7B01G498100.1	Wheat	cytosol	41.79	41.49
Bra016320.1-P	Field mustard	plastid	34.54	37.34
Bra008607.1-P	Field mustard	cytosol	8.45	31.25
Bra005476.1-P	Field mustard	cytosol	8.94	30.33
Bra021405.1-P	Field mustard	cytosol	8.94	25.17
Bra006363.1-P	Field mustard	cytosol	8.7	25.0

Protein Annotations

EnsemblPlants:Bra027824.1	EnsemblPlants:Bra027824.1-P	EnsemblPlantsGene:Bra027824	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:DnaJ_domain_CS
InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR44272	PANTHER:PTHR44272:SF2	PFAM:PF00226
PFscan:PS50076	PRINTS:PR00625	ScanProsite:PS00636	SEG:seg	SMART:SM00271	SUPFAM:SSF46565
UniParc:UPI0002542749	UniProt:M4EGB0	MapMan:26.3.1.3	:	:	:

Description

AT1G59980 (E=2e-193) ATDJC39, ARL2 | ARL2 (ARG1-LIKE 2); heat shock protein binding / unfolded protein binding

Coordinates

chrA09:-:9025136..9027245

Molecular Weight (calculated)

46687.0 Da

IEP (calculated)

7.617

GRAVY (calculated)

-0.611

Length

414 amino acids

Sequence
(BLAST)

001: MPTHTSSEKE VAGKDELRRN PYEVLGIPSN STDQEIKSAY RRMALRYHPD KNPNDPVAAD MFKEVTFAYD VLSDPENRHQ YDTTASEAAG PENEDLELDL
101: SSLGAVNTMF AALFNKLGVQ IKTTVSANLL EVALNGTVTT LPLAVGQVVS RKVEKQSAHF YSVTLTEEES QAGLICKVHS SAKNKFKLLY FDQEESGGLR
201: LALQEDSRKT GKLSTAGLYF FGFPVYRFDP RVNSRALSRD PETGFFKRLD TFQPLEITEL KAGTHVFAVY GDNFFKSVSY TLEIFSSAPF ANEKETLRST
301: EAQIVSKRTE LLKFESEYHD VFSQFTDMAS KCAGEVQEID ELLKRRNEIC AAYTTFPPTK QSSSKSWGKG KSKKKKSSLL MEAREEGEVT VREENGVKKK
401: KWYNIQLRQD KKKN

Best Arabidopsis Sequence Match ( AT1G59980.1 )
(BLAST)

001: MATHSSRSEN KDAGEEDELR RRNPYEVLGI PSNSTDQEIK SAYRRMALRY HPDKNPDDPV AAEMFKEVTF AYEVLSDPEN RRLYDTTGSE AVGPENEDLE
101: LDLSSLGAVN TIFAALFNKL GVQIKTTVSA NLLGEALNGT VTTLPLMVGQ VVSRKVEKQS AHFYSVTLTE EEAQDGLICK VHSSAKNKFK LLYFDQVENG
201: GLSLALQEDS RKTGKLSTAG LYFFGFPVYR FDHRVNSRAL SRDPETGFFK RLDAFQPFEI TELKAGSHVF AVYGDNFFKS VSYTLEIFSS APFGNEKESL
301: RSTEAQIVSK RTELLKFEAE YHEVFAQFTE MASKCTGEVQ EIDELLKRRN EICAAYTIFP PTKQGSSKSR SWSKKKSSLL MEPREEGEVA VREEGGVKKK
401: KWYNIQLRQD KKKN

Arabidopsis Description

ATJ39Chaperone protein dnaJ 39 [Source:UniProtKB/Swiss-Prot;Acc:Q6XL73]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.