Factsheet for Bra008607.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX69435	Canola	cytosol	98.21	88.0
CDY49645	Canola	cytosol	97.32	87.2
Bra006363.1-P	Field mustard	cytosol	91.07	70.83
VIT_16s0039g01520.t01	Wine grape	cytosol	72.32	65.85
GSMUA_Achr2P12110_001	Banana	cytosol	66.96	62.5
Solyc03g097240.2.1	Tomato	cytosol	69.64	62.4
Os02t0693200-01	Rice	cytosol	66.96	61.98
KRH23998	Soybean	cytosol	67.86	61.79
PGSC0003DMT400068101	Potato	cytosol	68.75	61.6
KRH29318	Soybean	cytosol	67.86	60.8
EES05690	Sorghum	cytosol	66.07	60.66
AT5G16650.2	Thale cress	cytosol	89.29	59.88
Bra021405.1-P	Field mustard	cytosol	78.57	59.86
TraesCS6A01G264600.1	Wheat	cytosol	62.5	57.85
HORVU6Hr1G067130.1	Barley	cytosol	62.5	57.85
TraesCS6D01G250300.1	Wheat	cytosol	61.61	57.02
Zm00001d017685_P006	Maize	cytosol	63.39	50.35
Bra005476.1-P	Field mustard	cytosol	44.64	40.98
Bra004301.1-P	Field mustard	nucleus	36.61	10.17
Bra033942.1-P	Field mustard	nucleus	35.71	9.76
Bra024636.1-P	Field mustard	nucleus	37.5	9.72
Bra027824.1-P	Field mustard	nucleus	31.25	8.45
Bra016320.1-P	Field mustard	plastid	7.14	2.09

Protein Annotations

EnsemblPlants:Bra008607.1	EnsemblPlants:Bra008607.1-P	EnsemblPlantsGene:Bra008607	Gene3D:1.10.287.110	InterPro:DnaJ_domain	InterPro:IPR001623
InterPro:IPR036869	InterPro:J_dom_sf	PANTHER:PTHR45292	PFAM:PF00226	PFscan:PS50076	PRINTS:PR00625
SMART:SM00271	SUPFAM:SSF46565	UniParc:UPI0002544887	UniProt:M4CWL0	MapMan:35.2	:

Description

AT5G16650 (E=2e-055) | DNAJ heat shock N-terminal domain-containing protein

Coordinates

chrA10:+:13038408..13039619

Molecular Weight (calculated)

13167.7 Da

IEP (calculated)

6.105

GRAVY (calculated)

-0.587

Length

112 amino acids

Sequence
(BLAST)

001: MEDHDKSPPP KDYYKILEVD YDATEELIRL SYRKLALKWH PDKHKGDTAA KERFIEINEA YNVLIDPAAR FEYDLTGIYE IHKYTLREYL ARFKGMILTC
101: NGLGISQSLA PW

Best Arabidopsis Sequence Match ( AT5G16650.1 )
(BLAST)

001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.