Factsheet for VIT_16s0039g01520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
endoplasmic reticulum 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra008607.1-P	Field mustard	cytosol	65.85	72.32
GSMUA_Achr2P12110_001	Banana	cytosol	69.92	71.67
KRH23998	Soybean	cytosol	71.54	71.54
Os02t0693200-01	Rice	cytosol	69.11	70.25
EES05690	Sorghum	cytosol	69.11	69.67
Solyc03g097240.2.1	Tomato	cytosol	70.73	69.6
CDY49645	Canola	cytosol	70.73	69.6
PGSC0003DMT400068101	Potato	cytosol	70.73	69.6
CDX70703	Canola	cytosol	70.73	69.05
CDX78701	Canola	cytosol	70.73	69.05
CDX69435	Canola	cytosol	69.92	68.8
KRH29318	Soybean	cytosol	68.29	67.2
TraesCS6D01G250300.1	Wheat	cytosol	65.04	66.12
TraesCS6A01G264600.1	Wheat	cytosol	64.23	65.29
HORVU6Hr1G067130.1	Barley	cytosol	64.23	65.29
Bra006363.1-P	Field mustard	cytosol	69.11	59.03
Zm00001d017685_P006	Maize	cytosol	67.48	58.87
Bra021405.1-P	Field mustard	cytosol	68.29	57.14
CDY53751	Canola	cytosol	71.54	56.05
AT5G16650.2	Thale cress	cytosol	74.8	55.09
VIT_18s0001g07260.t01	Wine grape	cytosol	50.41	44.93
CDY33230	Canola	endoplasmic reticulum, extracellular	63.41	43.82
VIT_01s0011g03790.t01	Wine grape	nucleus	39.02	11.57
VIT_01s0026g00840.t01	Wine grape	cytosol	34.96	10.54

Protein Annotations

Gene3D:1.10.287.110	EntrezGene:100244367	wikigene:100244367	MapMan:35.2	ProteinID:CBI26473	ProteinID:CBI26473.3
UniProt:D7T7K2	InterPro:DnaJ_domain	EMBL:FN595750	InterPro:IPR001623	InterPro:IPR036869	InterPro:J_dom_sf
EntrezGene:LOC100244367	wikigene:LOC100244367	PFAM:PF00226	PRINTS:PR00625	PFscan:PS50076	PANTHER:PTHR45292
PANTHER:PTHR45292:SF1	SMART:SM00271	SUPFAM:SSF46565	TIGR:TC54658	UniParc:UPI0001984CE4	ArrayExpress:VIT_16s0039g01520
EnsemblPlantsGene:VIT_16s0039g01520	EnsemblPlants:VIT_16s0039g01520.t01	unigene:Vvi.9437	RefSeq:XP_002271034	RefSeq:XP_002271034.1	:

Description

No Description!

Coordinates

chr16:+:1113429..1118305

Molecular Weight (calculated)

14483.0 Da

IEP (calculated)

6.680

GRAVY (calculated)

-0.919

Length

123 amino acids

Sequence
(BLAST)

001: MESNDSSTHK DYYKVLEVDY DATNEKIKLN YRRLALKWHP DKHKGDNAVT EKFQLINEAY KVLSDPAKRL DYDLTGNYEI DKYTLREYLT RFKGMILTCN
101: GLGISHTSIW TQQLMDTNDH SDK

Best Arabidopsis Sequence Match ( AT5G16650.1 )
(BLAST)

001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV

Arabidopsis Description

Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.