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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX70703 Canola cytosol 96.83 96.83
CDX69435 Canola cytosol 91.27 92.0
CDY49645 Canola cytosol 88.89 89.6
Bra006363.1-P Field mustard cytosol 89.68 78.47
VIT_16s0039g01520.t01 Wine grape cytosol 69.05 70.73
Solyc03g097240.2.1 Tomato cytosol 67.46 68.0
PGSC0003DMT400068101 Potato cytosol 66.67 67.2
AT5G16650.2 Thale cress cytosol 88.1 66.47
GSMUA_Achr2P12110_001 Banana cytosol 62.7 65.83
KRH23998 Soybean cytosol 62.7 64.23
CDY53751 Canola cytosol 78.57 63.06
Os02t0693200-01 Rice cytosol 60.32 62.81
KRH29318 Soybean cytosol 61.9 62.4
EES05690 Sorghum cytosol 59.52 61.48
TraesCS6D01G250300.1 Wheat cytosol 57.94 60.33
TraesCS6A01G264600.1 Wheat cytosol 57.14 59.5
HORVU6Hr1G067130.1 Barley cytosol 57.14 59.5
CDY33230 Canola endoplasmic reticulum, extracellular 78.57 55.62
Zm00001d017685_P006 Maize cytosol 57.14 51.06
CDY71923 Canola cytosol 38.1 45.28
CDY17195 Canola cytosol 38.89 40.16
CDY27949 Canola cytosol 38.1 39.34
CDY65889 Canola cytosol 24.6 34.07
CDY24259 Canola cytosol 8.73 22.45
CDX92921 Canola extracellular, plasma membrane 20.63 12.87
CDY50519 Canola nucleus 35.71 11.06
CDX96027 Canola nucleus 34.92 10.73
CDY59029 Canola nucleus 34.13 10.49
CDY44905 Canola nucleus 34.13 10.49
CDY60793 Canola nucleus 35.71 10.42
CDY16243 Canola nucleus 35.71 10.3
CDX81506 Canola nucleus 33.33 10.0
CDY30918 Canola cytosol 30.16 9.22
CDY45159 Canola cytosol 30.16 9.2
CDY24260 Canola plastid 18.25 9.16
CDY71746 Canola endoplasmic reticulum, extracellular 11.9 7.18
CDY50516 Canola nucleus 19.84 7.1
CDY62617 Canola extracellular 11.11 7.0
CDY34584 Canola extracellular, mitochondrion, plasma membrane, vacuole 11.9 6.1
CDY37476 Canola extracellular, plasma membrane 8.73 4.74
CDY68909 Canola nucleus 2.38 1.51
Protein Annotations
EnsemblPlants:CDX78701EnsemblPlantsGene:GSBRNA2T00130128001Gene3D:1.10.287.110InterPro:DnaJ_domainInterPro:IPR001623InterPro:IPR036869
InterPro:J_dom_sfPANTHER:PTHR45292PFAM:PF00226PFscan:PS50076PRINTS:PR00625ProteinID:CDX78701
ProteinID:CDX78701.1SMART:SM00271SUPFAM:SSF46565UniParc:UPI0004EEF023MapMan:35.2:
Description
BnaA03g06130D
Coordinates
chrLK031815:-:1869808..1871478
Molecular Weight (calculated)
14699.2 Da
IEP (calculated)
4.982
GRAVY (calculated)
-0.749
Length
126 amino acids
Sequence
(BLAST)
001: MEDNDKSPPP KDYYKILEVD YDATEELIRL NYRKLALKWH PDKHKGDTAA AEKFIEINDA YNVLMDPDAR FEYDLTGIYE IHKYTLREYL ARFKGMILTC
101: NGLGISQSSS LWTHQLSETT NKTTTD
Best Arabidopsis Sequence Match ( AT5G16650.1 )
(BLAST)
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.