Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX70703 | Canola | cytosol | 96.83 | 96.83 |
CDX69435 | Canola | cytosol | 91.27 | 92.0 |
CDY49645 | Canola | cytosol | 88.89 | 89.6 |
Bra006363.1-P | Field mustard | cytosol | 89.68 | 78.47 |
VIT_16s0039g01520.t01 | Wine grape | cytosol | 69.05 | 70.73 |
Solyc03g097240.2.1 | Tomato | cytosol | 67.46 | 68.0 |
PGSC0003DMT400068101 | Potato | cytosol | 66.67 | 67.2 |
AT5G16650.2 | Thale cress | cytosol | 88.1 | 66.47 |
GSMUA_Achr2P12110_001 | Banana | cytosol | 62.7 | 65.83 |
KRH23998 | Soybean | cytosol | 62.7 | 64.23 |
CDY53751 | Canola | cytosol | 78.57 | 63.06 |
Os02t0693200-01 | Rice | cytosol | 60.32 | 62.81 |
KRH29318 | Soybean | cytosol | 61.9 | 62.4 |
EES05690 | Sorghum | cytosol | 59.52 | 61.48 |
TraesCS6D01G250300.1 | Wheat | cytosol | 57.94 | 60.33 |
TraesCS6A01G264600.1 | Wheat | cytosol | 57.14 | 59.5 |
HORVU6Hr1G067130.1 | Barley | cytosol | 57.14 | 59.5 |
CDY33230 | Canola | endoplasmic reticulum, extracellular | 78.57 | 55.62 |
Zm00001d017685_P006 | Maize | cytosol | 57.14 | 51.06 |
CDY71923 | Canola | cytosol | 38.1 | 45.28 |
CDY17195 | Canola | cytosol | 38.89 | 40.16 |
CDY27949 | Canola | cytosol | 38.1 | 39.34 |
CDY65889 | Canola | cytosol | 24.6 | 34.07 |
CDY24259 | Canola | cytosol | 8.73 | 22.45 |
CDX92921 | Canola | extracellular, plasma membrane | 20.63 | 12.87 |
CDY50519 | Canola | nucleus | 35.71 | 11.06 |
CDX96027 | Canola | nucleus | 34.92 | 10.73 |
CDY59029 | Canola | nucleus | 34.13 | 10.49 |
CDY44905 | Canola | nucleus | 34.13 | 10.49 |
CDY60793 | Canola | nucleus | 35.71 | 10.42 |
CDY16243 | Canola | nucleus | 35.71 | 10.3 |
CDX81506 | Canola | nucleus | 33.33 | 10.0 |
CDY30918 | Canola | cytosol | 30.16 | 9.22 |
CDY45159 | Canola | cytosol | 30.16 | 9.2 |
CDY24260 | Canola | plastid | 18.25 | 9.16 |
CDY71746 | Canola | endoplasmic reticulum, extracellular | 11.9 | 7.18 |
CDY50516 | Canola | nucleus | 19.84 | 7.1 |
CDY62617 | Canola | extracellular | 11.11 | 7.0 |
CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 11.9 | 6.1 |
CDY37476 | Canola | extracellular, plasma membrane | 8.73 | 4.74 |
CDY68909 | Canola | nucleus | 2.38 | 1.51 |
Protein Annotations
EnsemblPlants:CDX78701 | EnsemblPlantsGene:GSBRNA2T00130128001 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 | InterPro:IPR036869 |
InterPro:J_dom_sf | PANTHER:PTHR45292 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 | ProteinID:CDX78701 |
ProteinID:CDX78701.1 | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI0004EEF023 | MapMan:35.2 | : |
Description
BnaA03g06130D
Coordinates
chrLK031815:-:1869808..1871478
Molecular Weight (calculated)
14699.2 Da
IEP (calculated)
4.982
GRAVY (calculated)
-0.749
Length
126 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDNDKSPPP KDYYKILEVD YDATEELIRL NYRKLALKWH PDKHKGDTAA AEKFIEINDA YNVLMDPDAR FEYDLTGIYE IHKYTLREYL ARFKGMILTC
101: NGLGISQSSS LWTHQLSETT NKTTTD
101: NGLGISQSSS LWTHQLSETT NKTTTD
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.