Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 4
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra008607.1-P | Field mustard | cytosol | 70.83 | 91.07 |
| CDX78701 | Canola | cytosol | 78.47 | 89.68 |
| CDX70703 | Canola | cytosol | 75.69 | 86.51 |
| VIT_16s0039g01520.t01 | Wine grape | cytosol | 59.03 | 69.11 |
| Solyc03g097240.2.1 | Tomato | cytosol | 56.94 | 65.6 |
| PGSC0003DMT400068101 | Potato | cytosol | 55.56 | 64.0 |
| AT5G16650.2 | Thale cress | cytosol | 73.61 | 63.47 |
| Bra021405.1-P | Field mustard | cytosol | 63.89 | 62.59 |
| GSMUA_Achr2P12110_001 | Banana | cytosol | 52.08 | 62.5 |
| KRH23998 | Soybean | cytosol | 52.78 | 61.79 |
| KRH29318 | Soybean | cytosol | 52.78 | 60.8 |
| Os02t0693200-01 | Rice | cytosol | 50.69 | 60.33 |
| EES05690 | Sorghum | cytosol | 50.69 | 59.84 |
| TraesCS6D01G250300.1 | Wheat | cytosol | 48.61 | 57.85 |
| TraesCS6A01G264600.1 | Wheat | cytosol | 47.92 | 57.02 |
| HORVU6Hr1G067130.1 | Barley | cytosol | 47.92 | 57.02 |
| Zm00001d017685_P006 | Maize | cytosol | 48.61 | 49.65 |
| Bra005476.1-P | Field mustard | cytosol | 33.33 | 39.34 |
| Bra004301.1-P | Field mustard | nucleus | 29.86 | 10.67 |
| Bra033942.1-P | Field mustard | nucleus | 29.17 | 10.24 |
| Bra024636.1-P | Field mustard | nucleus | 30.56 | 10.19 |
| Bra027824.1-P | Field mustard | nucleus | 25.0 | 8.7 |
| Bra016320.1-P | Field mustard | plastid | 6.25 | 2.35 |
Protein Annotations
| EnsemblPlants:Bra006363.1 | EnsemblPlants:Bra006363.1-P | EnsemblPlantsGene:Bra006363 | Gene3D:1.10.287.110 | InterPro:DnaJ_domain | InterPro:IPR001623 |
| InterPro:IPR036869 | InterPro:J_dom_sf | PANTHER:PTHR45292 | PFAM:PF00226 | PFscan:PS50076 | PRINTS:PR00625 |
| SEG:seg | SMART:SM00271 | SUPFAM:SSF46565 | UniParc:UPI000253F606 | UniProt:M4CQ74 | MapMan:35.2 |
Description
AT5G16650 (E=5e-051) | DNAJ heat shock N-terminal domain-containing protein
Coordinates
chrA03:-:3186659..3188092
Molecular Weight (calculated)
16543.7 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.660
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDNDKSPPP KDYYKILEVD YDATEELIRL NYRKLALKWH PDKHKGDTAA AEKFIEINDA YNVLMDPDAR FEYDLTGIYE IHKYTLREYL ARFKGMILTC
101: NGLGISQSSS LCLLSSPKLL AAGHINCLRP PTKQQQTSKD KSRS
101: NGLGISQSSS LCLLSSPKLL AAGHINCLRP PTKQQQTSKD KSRS
001: MEDNDKSPPK DYYKILEVDY DATEELIRLN YRKLALKWHP DKHKGDSAAT EKFQEINEAY NVLMDPAKRF EYDFTGIYEI HKYTLREYLA RFKGMILTCN
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
101: GLGISQSSSP WTHQLAETTK QQTSKDTV
Arabidopsis Description
Chaperone DnaJ-domain superfamily protein [Source:TAIR;Acc:AT5G16650]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.