Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY71746 | Canola | endoplasmic reticulum, extracellular | 68.1 | 75.6 |
| CDY62617 | Canola | extracellular | 61.64 | 71.5 |
| CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 68.97 | 65.04 |
| CDY24259 | Canola | cytosol | 7.76 | 36.73 |
| KRH65752 | Soybean | cytosol | 12.07 | 30.11 |
| CDY50519 | Canola | nucleus | 44.4 | 25.31 |
| CDY60793 | Canola | nucleus | 42.24 | 22.69 |
| CDY16243 | Canola | nucleus | 42.24 | 22.43 |
| CDY50516 | Canola | nucleus | 32.76 | 21.59 |
| CDY30918 | Canola | cytosol | 32.76 | 18.45 |
| CDY45159 | Canola | cytosol | 32.76 | 18.4 |
| CDX96027 | Canola | nucleus | 31.03 | 17.56 |
| CDY59029 | Canola | nucleus | 30.6 | 17.32 |
| CDY44905 | Canola | nucleus | 30.17 | 17.07 |
| CDX81506 | Canola | nucleus | 29.74 | 16.43 |
| CDY65889 | Canola | cytosol | 6.03 | 15.38 |
| CDX92921 | Canola | extracellular, plasma membrane | 8.19 | 9.41 |
| KRH49472 | Soybean | cytosol | 11.21 | 9.06 |
| CDY17195 | Canola | cytosol | 4.74 | 9.02 |
| CDY27949 | Canola | cytosol | 4.74 | 9.02 |
| CDY49645 | Canola | cytosol | 4.74 | 8.8 |
| CDX70703 | Canola | cytosol | 4.74 | 8.73 |
| CDX78701 | Canola | cytosol | 4.74 | 8.73 |
| CDY71923 | Canola | cytosol | 3.88 | 8.49 |
| CDY53751 | Canola | cytosol | 5.6 | 8.28 |
| CDX69435 | Canola | cytosol | 4.31 | 8.0 |
| CDY33230 | Canola | endoplasmic reticulum, extracellular | 5.6 | 7.3 |
| CDY24260 | Canola | plastid | 7.33 | 6.77 |
| Os06t0237800-01 | Rice | cytosol, nucleus | 1.29 | 1.86 |
| CDY68909 | Canola | nucleus | 0.0 | 0.0 |
| GSMUA_Achr4P06780_001 | Banana | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY37476 | EnsemblPlantsGene:GSBRNA2T00064063001 | PANTHER:PTHR44272 | PANTHER:PTHR44272:SF2 | ProteinID:CDY37476 | ProteinID:CDY37476.1 |
| SEG:seg | UniParc:UPI0004EF2F95 | UniProt:A0A078HIA7 | MapMan:26.3.1.3 | : | : |
Description
BnaC08g46140DBnaC08g46140D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HIA7]
Coordinates
chrLK032400:+:346626..348331
Molecular Weight (calculated)
25502.6 Da
IEP (calculated)
6.868
GRAVY (calculated)
0.617
Length
232 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGGSEILLL AQLLLIWDLD IKLTICHFLF TRNVNNHPFE HLSVSAIVVG GSSAIPFSLI CTIELASTIG AITTLDCITG TVLIPSLDPQ VSSVFRWLRE
101: KKTMMMRMMI LCYCNGIRTR TFDISQKGQE LELDLSSLGA VNTVFAALFS MSCEFANLVV SVDPLLLGQT VTKKVAKQCA HFYAVTITEV EIISGLVCRV
201: ESCSKSKFNL LYFDQKANGG LSLAMQVLFS FI
101: KKTMMMRMMI LCYCNGIRTR TFDISQKGQE LELDLSSLGA VNTVFAALFS MSCEFANLVV SVDPLLLGQT VTKKVAKQCA HFYAVTITEV EIISGLVCRV
201: ESCSKSKFNL LYFDQKANGG LSLAMQVLFS FI
001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC
Arabidopsis Description
ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.