Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os02t0741100-01 | Rice | nucleus | 65.22 | 23.76 |
| Os01t0512100-01 | Rice | plasma membrane | 35.4 | 14.14 |
| GSMUA_Achr4P06780_001 | Banana | cytosol | 4.35 | 12.96 |
| KRH49472 | Soybean | cytosol | 19.25 | 10.8 |
| Os02t0693200-01 | Rice | cytosol | 1.86 | 2.48 |
| KRH65752 | Soybean | cytosol | 1.24 | 2.15 |
| CDY71746 | Canola | endoplasmic reticulum, extracellular | 1.86 | 1.44 |
| CDY37476 | Canola | extracellular, plasma membrane | 1.86 | 1.29 |
| CDY34584 | Canola | extracellular, mitochondrion, plasma membrane, vacuole | 1.86 | 1.22 |
| Os02t0760000-00 | Rice | cytosol | 1.24 | 0.84 |
| CDY62617 | Canola | extracellular | 0.0 | 0.0 |
| Os03t0262500-01 | Rice | plasma membrane, plastid | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os06t0237800-01 | EnsemblPlantsGene:Os06g0237800 | ncoils:Coil | PANTHER:PTHR44272 | PANTHER:PTHR44272:SF1 | ProteinID:BAS96970.1 |
| SEG:seg | UniParc:UPI000393C4C4 | UniProt:A0A0P0WUV0 | MapMan:35.1 | : | : |
Description
DnaJ domain protein C54Similar to chaperone protein dnaJ 16. (Os06t0237800-01)
Coordinates
chr6:-:7160043..7161351
Molecular Weight (calculated)
18738.1 Da
IEP (calculated)
10.106
GRAVY (calculated)
-1.238
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: GDNFFRSVNY TIEVVCGESF PAEKEKLQSV EAKILTKRAE LSKFETEYRE VLAKFTEMTS RYTQEMQAID NLLKERNEIH ASYTNNSPLK RSSSRSKAKS
101: PSKFSKGEEE NSQRKEKKVK DQPTGGCRSA DEDSNEKKTK ERFPKKKWLN IPFKIDRRKP C
101: PSKFSKGEEE NSQRKEKKVK DQPTGGCRSA DEDSNEKKTK ERFPKKKWLN IPFKIDRRKP C
001: MPGHRSKSEK KDADKQLRRD PYEVLGVLRN STDQEIKSAY RKLALKYHPD KTANDPVAAD MFKEVTFSYN ILSDPEKRRQ FDSAGFEAVE AESQELELDL
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC
101: SSLGAVNTVF AALFSKLGVP IKTSVSATIL EEALNGRVSV DPLVLGQAVS KKVEKQCAHF YAVTISEEEV SAGLVCRVES SSKSKFKLLY FDQEANSGLS
201: LALQEDSKRT GKITSAGMYF LGFPVYRLDH TINSMAQAKD PETAFFKKLD GFQQCEVTEL KAGTHVFAVY GDNFFKNVSY TIQVLCAAAF TQEKEDLRSV
301: EAQILTKRAE LAKFETEYRE VLVQFTDMTS RYAQEMQSID ELLKQRNEIH SAYTTIPLMK RSSSKNRMRK SSFKKAAAKA PAPTEQEEEE EEEEEEEEES
401: SRQKNKKPST CDKSETLKKK SKWFNLHLKL DKKKPC
Arabidopsis Description
ATJ16Chaperone protein dnaJ 16 [Source:UniProtKB/Swiss-Prot;Acc:Q8VXV4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.